RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 LONP1P36776 959 aaKnown RBP7.83□□□□□ -1.16
YBX3-209ENST00000540747 EIF2DP41214 584 aaKnown RBP7.83□□□□□ -1.16
YBX3-209ENST00000540747 UBA7P41226 1012 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 PI4KAP42356 2102 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 PTGER3P43115 390 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 KIR2DL1P43626 348 aaPredicted RBP7.83□□□□□ -1.16
YBX3-209ENST00000540747 USP46P62068 366 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 SLC7A9P82251 487 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 MRPS21P82921 87 aaKnown RBP7.83□□□□□ -1.16
YBX3-209ENST00000540747 SEMA3BQ13214 749 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 DHX8Q14562 1220 aaKnown RBP7.83□□□□□ -1.16
YBX3-209ENST00000540747 POSTNQ15063 836 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 MAP7D1Q3KQU3 841 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 HSF5Q4G112 596 aaPredicted RBP7.83□□□□□ -1.16
YBX3-209ENST00000540747 SPDYCQ5MJ68 293 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 ANO7Q6IWH7 933 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 IL17RCQ8NAC3 791 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 DEFB124Q8NES8 71 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 LARP4BQ92615 738 aaKnown RBP7.83□□□□□ -1.16
YBX3-209ENST00000540747 DNAJC19Q96DA6 116 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 CALML4Q96GE6 196 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 CD248Q9HCU0 757 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 TRPC7Q9HCX4 862 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 CRTAC1Q9NQ79 661 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 TMEM74BQ9NUR3 256 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 TMEM30AQ9NV96 361 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 ITGA11Q9UKX5 1188 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 AGAP1Q9UPQ3 857 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 NME7Q9Y5B8 376 aa7.83□□□□□ -1.16
YBX3-209ENST00000540747 PTPRJQ12913 1337 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 FRMD3A2A2Y4 597 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 ZNF840PA6NDX5 716 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 SGK1O00141 431 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 HUS1O60921 280 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 ATP2C2O75185 946 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 OAS1P00973 400 aaKnown RBP7.82□□□□□ -1.16
YBX3-209ENST00000540747 HDCP19113 662 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 GARTP22102 1010 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 LMO2P25791 158 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 PCSK1P29120 753 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 HOXD12P35452 270 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 DDIT3P35638 169 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 SLC6A11P48066 632 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 LHX1P48742 406 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 CASP5P51878 434 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 SEC13P55735 322 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 NOP14P78316 857 aaKnown RBP7.82□□□□□ -1.16
YBX3-209ENST00000540747 TFAMQ00059 246 aaKnown RBP7.82□□□□□ -1.16
YBX3-209ENST00000540747 MYL7Q01449 175 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 NR1H3Q13133 447 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 KCNB1Q14721 858 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 DHCR24Q15392 516 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 C2orf27AQ580R0 203 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 L1TD1Q5T7N2 865 aaKnown RBP7.82□□□□□ -1.16
YBX3-209ENST00000540747 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 SLC23A3Q6PIS1 610 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 RHBDF2Q6PJF5 856 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 VSTM1Q6UX27 236 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 USP49Q70CQ1 688 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 C12orf40Q86WS4 652 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 SYT12Q8IV01 421 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 ETFBKMTQ8IXQ9 262 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 ADGRF2Q8IZF7 708 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 ADGRG2Q8IZP9 1017 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 CCDC33Q8N5R6 958 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 ALLCQ8N6M5 410 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 FRMD1Q8N878 549 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 POMGNT1Q8WZA1 660 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 PIGKQ92643 395 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 MYLPFQ96A32 169 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 SAAL1Q96ER3 474 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 ZFRQ96KR1 1074 aaKnown RBP7.82□□□□□ -1.16
YBX3-209ENST00000540747 DUSP9Q99956 384 aaKnown RBP7.82□□□□□ -1.16
YBX3-209ENST00000540747 FAM213AQ9BRX8 229 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 FGFBP2Q9BYJ0 223 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 RNF38Q9H0F5 515 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 CAPN10Q9HC96 672 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 OLFML3Q9NRN5 406 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 SEL1LQ9UBV2 794 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 PILRBQ9UKJ0 227 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 HCN2Q9UL51 889 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 MSRB2Q9Y3D2 182 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 KALRNO60229 2985 aa7.82□□□□□ -1.16
YBX3-209ENST00000540747 CFAP46Q8IYW2 2715 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 MYMKA6NI61 221 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 TAF4O00268 1085 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 HYAL3O43820 417 aaPredicted RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 KAT7O95251 611 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 CD2BP2O95400 341 aaKnown RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 KLF8O95600 359 aaPredicted RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 BMP15O95972 392 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 KRT18P05783 430 aaKnown RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 ENGP17813 658 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 WARSP23381 471 aaKnown RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 DHPSP49366 369 aaPredicted RBP7.81□□□□□ -1.16
YBX3-209ENST00000540747 PDE6CP51160 858 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 CACNA2D1P54289 1103 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 RBP5P82980 135 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 RING1Q06587 406 aa7.81□□□□□ -1.16
YBX3-209ENST00000540747 LMAN2Q12907 356 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms