RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ZNF280CQ8ND82 737 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 ARL8BQ9NVJ2 186 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 ADCY3O60266 1144 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 FAM189A1O60320 539 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 WEE2P0C1S8 567 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 PTPRAP18433 802 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 ETV4P43268 484 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 NEK3P51956 506 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 YWHAEP62258 255 aaKnown RBP12.86□□□□□ -0.35
NPC1-202ENST00000540608 SLC18A2Q05940 514 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 DPYSL3Q14195 570 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 KRT72Q14CN4 511 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 PRKD1Q15139 912 aaPredicted RBP12.86□□□□□ -0.35
NPC1-202ENST00000540608 DUOXA2Q1HG44 320 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 TSNAXIP1Q2TAA8 658 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 SMYD5Q6GMV2 418 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 DENND1BQ6P3S1 775 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 RFWD3Q6PCD5 774 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 SH2D5Q6ZV89 423 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 KIAA0319LQ8IZA0 1049 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 JOSD2Q8TAC2 188 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 SKA1Q96BD8 255 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 ALG13Q9NP73 1137 aaKnown RBP12.86□□□□□ -0.35
NPC1-202ENST00000540608 STOML1Q9UBI4 398 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 ADAMTS5Q9UNA0 930 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 DOCK1Q14185 1865 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 PHIPQ8WWQ0 1821 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 ABLIM1O14639 778 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 CDK16Q00536 496 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 PTPN20Q4JDL3 420 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 FAM71DQ8N9W8 422 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 ARMC2Q8NEN0 867 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 DNAJC9Q8WXX5 260 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 WRNIP1Q96S55 665 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 LHX5Q9H2C1 402 aa12.86□□□□□ -0.35
NPC1-202ENST00000540608 IL1BP01584 269 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 CD48P09326 243 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 DLDP09622 509 aaKnown RBP12.85□□□□□ -0.35
NPC1-202ENST00000540608 LINGO3P0C6S8 592 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 RFC5P40937 340 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 CCNHP51946 323 aaPredicted RBP12.85□□□□□ -0.35
NPC1-202ENST00000540608 EIF3EP60228 445 aaKnown RBP12.85□□□□□ -0.35
NPC1-202ENST00000540608 FSTL1Q12841 308 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 TRPC3Q13507 836 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 CAPSQ13938 189 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 IGDCC3Q8IVU1 814 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 TAB3Q8N5C8 712 aaPredicted RBP12.85□□□□□ -0.35
NPC1-202ENST00000540608 KCTD6Q8NC69 237 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 CMASQ8NFW8 434 aaPredicted RBP12.85□□□□□ -0.35
NPC1-202ENST00000540608 SLC44A1Q8WWI5 657 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 APOPT1Q96IL0 206 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 SERAC1Q96JX3 654 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 TMEM120AQ9BXJ8 343 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 IKBKGQ9Y6K9 419 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 APOC4-APOC2K7ER74 178 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 GYG2O15488 501 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 APOC2P02655 101 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 SERPINB3P29508 390 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 ELK3P41970 407 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 IRX1P78414 480 aaPredicted RBP12.85□□□□□ -0.35
NPC1-202ENST00000540608 MRPS35P82673 323 aaKnown RBP12.85□□□□□ -0.35
NPC1-202ENST00000540608 ZNF200P98182 395 aaPredicted RBP12.85□□□□□ -0.35
NPC1-202ENST00000540608 PTK7Q13308 1070 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 DSTYKQ6XUX3 929 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 ZBTB33Q86T24 672 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 RFX6Q8HWS3 928 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 TCHPQ9BT92 498 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 SLC24A3Q9HC58 644 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 CHMP2BQ9UQN3 213 aa12.85□□□□□ -0.35
NPC1-202ENST00000540608 TCRBV9S1A1TA0A576 114 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 TOM1L1O75674 476 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 ASPAP45381 313 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 GMPSP49915 693 aaPredicted RBP12.84□□□□□ -0.35
NPC1-202ENST00000540608 PSMC1P62191 440 aaKnown RBP12.84□□□□□ -0.35
NPC1-202ENST00000540608 BASP1P80723 227 aaKnown RBP12.84□□□□□ -0.35
NPC1-202ENST00000540608 ZBTB16Q05516 673 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 FAAP100Q0VG06 881 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 MTM1Q13496 603 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 SURF1Q15526 300 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 APBB1IPQ7Z5R6 666 aaPredicted RBP12.84□□□□□ -0.35
NPC1-202ENST00000540608 CNTN3Q9P232 1028 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 CYTH4Q9UIA0 394 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.84□□□□□ -0.35
NPC1-202ENST00000540608 IGKV6D-21A0A0A0MT36 114 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 NFKBIEO00221 500 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 MCF2LO15068 1137 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 RBP3P10745 1247 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 STIP1P31948 543 aaKnown RBP12.84□□□□□ -0.35
NPC1-202ENST00000540608 ICAM3P32942 547 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 VHLP40337 213 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 CBLBQ13191 982 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 TARBP2Q15633 366 aaKnown RBP12.84□□□□□ -0.35
NPC1-202ENST00000540608 KBTBD12Q3ZCT8 623 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.84□□□□□ -0.35
NPC1-202ENST00000540608 ZNF333Q96JL9 665 aa12.84□□□□□ -0.35
NPC1-202ENST00000540608 FAM111AQ96PZ2 611 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms