RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 AP2B1P63010 937 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 FKBP1BP68106 108 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 GCNT1Q02742 428 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ZACNQ401N2 412 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ZNF484Q5JVG2 852 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ANKRD23Q86SG2 305 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 CENPKQ9BS16 269 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 MTMR12Q9C0I1 747 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 MRPL46Q9H2W6 279 aaKnown RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 DHX35Q9H5Z1 703 aaKnown RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 COQ4Q9Y3A0 265 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 CCDC78A2IDD5 438 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 CST8O60676 142 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 TBXAS1P24557 533 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 SDC4P31431 198 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ESRRGP62508 458 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 TAF1CQ15572 869 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 TMEM154Q6P9G4 183 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 RASSF3Q86WH2 238 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ROPN1BQ9BZX4 212 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ROPN1Q9HAT0 212 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-202ENST00000540010 ASNSD1Q9NWL6 643 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 FAM53CQ9NYF3 392 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 SENP1Q9P0U3 644 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 PCDHB2Q9Y5E7 798 aa10.44□□□□□ -0.74
TRAF1-202ENST00000540010 DICER1Q9UPY3 1922 aaKnown RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 H3BRB1 525 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 PMM2O15305 246 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 MAGEB2O15479 319 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 DYNC1LI2O43237 492 aaPredicted RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 CREB3O43889 395 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 LGR5O75473 907 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 VTNP04004 478 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 RARGP13631 454 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 KRT4P19013 534 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 CDC25CP30307 473 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 STX1BP61266 288 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 CUL2Q13617 745 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 SPRYD7Q5W111 196 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 OR5B17Q8NGF7 314 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 ZNF516Q92618 1163 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 FGD4Q96M96 766 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 TUT1Q9H6E5 874 aaKnown RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 TTC4O95801 387 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 WEE2P0C1S8 567 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 RBP3P10745 1247 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 SLC1A1P43005 524 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 SH3BGRP55822 239 aaPredicted RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 MPZL3Q6UWV2 235 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 RBBP8NLQ8NC74 664 aaPredicted RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 CXorf38Q8TB03 319 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 TMEM174Q8WUU8 243 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 DNAJC9Q8WXX5 260 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 SERPINI1Q99574 410 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 ACO2Q99798 780 aaKnown RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 STRIP2Q9ULQ0 834 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 SMG5Q9UPR3 1016 aaKnown RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 A0A087WZ62 844 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 KIF1CO43896 1103 aaKnown RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 GZMAP12544 262 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 NQO1P15559 274 aaKnown RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 AP3M2P53677 418 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 ROR1Q01973 937 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 BRSK2Q8IWQ3 736 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 AGAP3Q96P47 875 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 PCDHB18PQ96TA0 734 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 FDXACB1Q9BRP7 624 aaPredicted RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 SUDS3Q9H7L9 328 aaPredicted RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 YY1AP1Q9H869 796 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 PRMT7Q9NVM4 692 aaPredicted RBP10.43□□□□□ -0.74
TRAF1-202ENST00000540010 SBF1O95248 1867 aa10.43□□□□□ -0.74
TRAF1-202ENST00000540010 H3BRJ5 948 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ACKR2O00590 384 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 KCNN4O15554 427 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 B4GALT5O43286 388 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 CCDC22O60826 627 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ARHGAP1Q07960 439 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 C4orf50Q6ZRC1 276 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 NT5DC3Q86UY8 548 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 AGGF1Q8N302 714 aaeCLIP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 STAMBPL1Q96FJ0 436 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 EFHD1Q9BUP0 239 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 FAM129AQ9BZQ8 928 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 DOCK5Q9H7D0 1870 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 GTF3C4Q9UKN8 822 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 NVLO15381 856 aaKnown RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 PIGRP01833 764 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 RRM1P23921 792 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 FMO1Q01740 532 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 POU5F1BQ06416 359 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ACVR2BQ13705 512 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 THOC5Q13769 683 aaKnown RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 PRPSAP1Q14558 356 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 DGKDQ16760 1214 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ZNF792Q3KQV3 632 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ANKRD20A4Q4UJ75 823 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ANKRD20A8PQ5CZ79 823 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ANKRD20A2Q5SQ80 823 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ANKRD20A1Q5TYW2 823 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 HEATR6Q6AI08 1181 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms