RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 ACO1P21399 889 aaKnown RBP11.37□□□□□ -0.59
HMGA2-209ENST00000539662 MAP3K7CLP57077 242 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 ZXDBP98169 803 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 CUL2Q13617 745 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 WDR44Q5JSH3 913 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 PHLDB3Q6NSJ2 640 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 GJB7Q6PEY0 223 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 CLEC20AQ6ZU45 233 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 EHBP1Q8NDI1 1231 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 USP13Q92995 863 aaPredicted RBP11.37□□□□□ -0.59
HMGA2-209ENST00000539662 NXPE3Q969Y0 559 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 JAKMIP2Q96AA8 810 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 CYFIP2Q96F07 1278 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 TRMT2BQ96GJ1 504 aaKnown RBP11.37□□□□□ -0.59
HMGA2-209ENST00000539662 TNIP3Q96KP6 325 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 KREMEN1Q96MU8 473 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 ZSWIM1Q9BR11 485 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 CRACR2AQ9BSW2 395 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 NT5C1AQ9BXI3 368 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 TRPV4Q9HBA0 871 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 ZFP14Q9HCL3 533 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 SLC2A4RGQ9NR83 387 aa11.37□□□□□ -0.59
HMGA2-209ENST00000539662 AJAP1Q9UKB5 411 aaPredicted RBP11.37□□□□□ -0.59
HMGA2-209ENST00000539662 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.37□□□□□ -0.59
HMGA2-209ENST00000539662 MYO16Q9Y6X6 1858 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 TULP2O00295 520 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 TRIM66O15016 1216 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 PMM2O15305 246 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 SLC9A1P19634 815 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 COL9A1P20849 921 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 CD72P21854 359 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 ANXA13P27216 316 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 CDC25CP30307 473 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 GDI1P31150 447 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 TAF10Q12962 218 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 BMP8AQ7Z5Y6 402 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 CMTM8Q8IZV2 173 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 TMEM105Q8N8V8 129 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 CCDC150Q8NCX0 1101 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 TTC8Q8TAM2 541 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 TFAP2BQ92481 460 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 TMEM176AQ96HP8 235 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 HEXIM2Q96MH2 286 aaKnown RBP11.36□□□□□ -0.59
HMGA2-209ENST00000539662 HNRNPABQ99729 332 aaKnown RBP11.36□□□□□ -0.59
HMGA2-209ENST00000539662 TTLL2Q9BWV7 592 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 FOXQ1Q9C009 403 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 INTS2Q9H0H0 1204 aaKnown RBP11.36□□□□□ -0.59
HMGA2-209ENST00000539662 CSNK1G1Q9HCP0 422 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 TRPC7Q9HCX4 862 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 HEBP1Q9NRV9 189 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 GCNT4Q9P109 453 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 CHORDC1Q9UHD1 332 aaPredicted RBP11.36□□□□□ -0.59
HMGA2-209ENST00000539662 FBXL21Q9UKT6 434 aa11.36□□□□□ -0.59
HMGA2-209ENST00000539662 MTF2Q9Y483 593 aaPredicted RBP11.36□□□□□ -0.59
HMGA2-209ENST00000539662 HELZP42694 1942 aaKnown RBP11.35□□□□□ -0.59
HMGA2-209ENST00000539662 ZNF840PA6NDX5 716 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 GOLGA6L22H0YM25 854 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 ARNTLO00327 626 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 GNA14O95837 355 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 CCDC192P0DO97 292 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 PSMC3P17980 439 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 ERCC5P28715 1186 aaPredicted RBP11.35□□□□□ -0.59
HMGA2-209ENST00000539662 SLC5A3P53794 718 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 ARHGAP15Q53QZ3 475 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 MIIPQ5JXC2 388 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 DPY19L2P1Q6NXN4 242 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 MON1AQ86VX9 555 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 MFSD6LQ8IWD5 586 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 NUP93Q8N1F7 819 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 PPM1KQ8N3J5 372 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 FBXL6Q8N531 539 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 ARL14EPQ8N8R7 260 aaPredicted RBP11.35□□□□□ -0.59
HMGA2-209ENST00000539662 FLCNQ8NFG4 579 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 SMARCD1Q96GM5 515 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 NT5C1BQ96P26 610 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 GPR88Q9GZN0 384 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 RNF38Q9H0F5 515 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 THAP9Q9H5L6 903 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 DMAP1Q9NPF5 467 aaPredicted RBP11.35□□□□□ -0.59
HMGA2-209ENST00000539662 ACP6Q9NPH0 428 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 IL37Q9NZH6 218 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 WNT16Q9UBV4 365 aa11.35□□□□□ -0.59
HMGA2-209ENST00000539662 OTOL1A6NHN0 477 aaPredicted RBP11.34□□□□□ -0.59
HMGA2-209ENST00000539662 SCAMP3O14828 347 aaKnown RBP11.34□□□□□ -0.59
HMGA2-209ENST00000539662 GABBR2O75899 941 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 FGF19O95750 216 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 ABL1P00519 1130 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 FAM200BP0CF97 657 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 MTIF2P46199 727 aaKnown RBP11.34□□□□□ -0.59
HMGA2-209ENST00000539662 SOX9P48436 509 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 TNK2Q07912 1038 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 TPD52L1Q16890 204 aaPredicted RBP11.34□□□□□ -0.59
HMGA2-209ENST00000539662 SLC44A4Q53GD3 710 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 CCDC183Q5T5S1 534 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 TRIM68Q6AZZ1 485 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 CAVIN1Q6NZI2 390 aaKnown RBP11.34□□□□□ -0.59
HMGA2-209ENST00000539662 TTC30AQ86WT1 665 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 TTC16Q8NEE8 873 aa11.34□□□□□ -0.59
HMGA2-209ENST00000539662 MRPS31Q92665 395 aaKnown RBP11.34□□□□□ -0.59
HMGA2-209ENST00000539662 WBP2Q969T9 261 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms