RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 ATP13A4Q4VNC1 1196 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 FNIP1Q8TF40 1166 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 TSPAN18Q96SJ8 248 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 CPXM1Q96SM3 734 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 TRAIPQ9BWF2 469 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 CALCOCO1Q9P1Z2 691 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 KIAA1257Q9ULG3 409 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 TET1Q8NFU7 2136 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 ZNF623O75123 536 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 CYP3A5P20815 502 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 PSMA2P25787 234 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 RFC1P35251 1148 aaPredicted RBP21.31■■□□□ 1
PACSIN3-211ENST00000539589 GNGT1P63211 74 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 KRT71Q3SY84 523 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 FAM126BQ8IXS8 530 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 ADAM2Q99965 735 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 MRPL45Q9BRJ2 306 aaKnown RBP21.31■■□□□ 1
PACSIN3-211ENST00000539589 EPB41L4BQ9H329 900 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 KLHL11Q9NVR0 708 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 CWC15Q9P013 229 aaKnown RBP21.31■■□□□ 1
PACSIN3-211ENST00000539589 SNX9Q9Y5X1 595 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 PI4K2BG5E9Z4 385 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 M0QYV0 167 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 CD4P01730 458 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 RARGP13631 454 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 ATP1A2P50993 1020 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 POLNQ7Z5Q5 900 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 ANKS1BQ7Z6G8 1248 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 RTN4RL1Q86UN2 441 aaPredicted RBP21.3■■□□□ 1
PACSIN3-211ENST00000539589 HOOK3Q86VS8 718 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 XYLT1Q86Y38 959 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 ARFGAP2Q8N6H7 521 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 CACNG4Q9UBN1 327 aa21.3■■□□□ 1
PACSIN3-211ENST00000539589 A0A0U1RQF3 1178 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 ATF2P15336 505 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 PTPN7P35236 360 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 MNX1P50219 401 aaPredicted RBP21.29■■□□□ 1
PACSIN3-211ENST00000539589 NDST1P52848 882 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 CAV1Q03135 178 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 LMNB2Q03252 620 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 MFSD7Q6UXD7 560 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 DNAJC5GQ8N7S2 189 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 NT5C1AQ9BXI3 368 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 TSPYL1Q9H0U9 437 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 BCCIPQ9P287 314 aaKnown RBP eCLIP21.29■■□□□ 1
PACSIN3-211ENST00000539589 ARL5CA6NH57 179 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 ERBB2P04626 1255 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 GABRB2P47870 512 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 KAZNQ674X7 775 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 SPOCD1Q6ZMY3 1216 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 ZNF365Q70YC5 407 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 CCDC89Q8N998 374 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 SEMA4AQ9H3S1 761 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 TJP2Q9UDY2 1190 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 GIT1Q9Y2X7 761 aa21.29■■□□□ 1
PACSIN3-211ENST00000539589 MKI67P46013 3256 aaKnown RBP21.28■■□□□ 1
PACSIN3-211ENST00000539589 EIF3HO15372 352 aaKnown RBP eCLIP21.28■■□□□ 1
PACSIN3-211ENST00000539589 XPOTO43592 962 aaKnown RBP21.28■■□□□ 1
PACSIN3-211ENST00000539589 KRT10P13645 584 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 IVDP26440 423 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 LRPAP1P30533 357 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 ADCY8P40145 1251 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 GPD2P43304 727 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 PDCLQ13371 301 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 SLC29A2Q14542 456 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 GPNMBQ14956 572 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 HADHQ16836 314 aaKnown RBP21.28■■□□□ 1
PACSIN3-211ENST00000539589 TFDP3Q5H9I0 405 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 JOSD2Q8TAC2 188 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 NEU2Q9Y3R4 380 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 SCN5AQ14524 2016 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 KRT7P08729 469 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 IBSPP21815 317 aaPredicted RBP21.28■■□□□ 1
PACSIN3-211ENST00000539589 STILQ15468 1287 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 TRIP13Q15645 432 aaPredicted RBP21.28■■□□□ 1
PACSIN3-211ENST00000539589 SOWAHAQ2M3V2 549 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 TXNRD3NBQ6F5E7 133 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 DPH6Q7L8W6 267 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 CROCCP2Q86T23 111 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 BBOF1Q8ND07 529 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 LINC01599Q8WXQ3 324 aa21.28■■□□□ 1
PACSIN3-211ENST00000539589 METTL5Q9NRN9 209 aaKnown RBP21.28■■□□□ 1
PACSIN3-211ENST00000539589 LRRD1A4D1F6 860 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 HPDP32754 393 aaPredicted RBP21.27■■□□□ 1
PACSIN3-211ENST00000539589 RAB27AP51159 221 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 SCNN1GP51170 649 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 DRICH1Q6PGQ1 229 aaPredicted RBP21.27■■□□□ 1
PACSIN3-211ENST00000539589 RHBDF2Q6PJF5 856 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 LCLAT1Q6UWP7 414 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 TRMT10CQ7L0Y3 403 aaKnown RBP21.27■■□□□ 1
PACSIN3-211ENST00000539589 CCDC25Q86WR0 208 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 HACE1Q8IYU2 909 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 IPO4Q8TEX9 1081 aaKnown RBP21.27■■□□□ 1
PACSIN3-211ENST00000539589 RAPGEF5Q92565 580 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 MCRS1Q96EZ8 462 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 FAM118BQ9BPY3 351 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 MIS12Q9H081 205 aa21.27■■□□□ 1
PACSIN3-211ENST00000539589 hCG_1818297A0A087WSY0 165 aa21.26■□□□□ 0.99
PACSIN3-211ENST00000539589 KPNA7A9QM74 516 aa21.26■□□□□ 0.99
PACSIN3-211ENST00000539589 TP73O15350 636 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms