RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CEP250Q9BV73 2442 aa23.67■■□□□ 1.38
SCARB1-206ENST00000539320 F8VP50 259 aa23.66■■□□□ 1.38
SCARB1-206ENST00000539320 RHOBTB3O94955 611 aa23.66■■□□□ 1.38
SCARB1-206ENST00000539320 C4BPAP04003 597 aaKnown RBP23.66■■□□□ 1.38
SCARB1-206ENST00000539320 ARSAP15289 507 aa23.66■■□□□ 1.38
SCARB1-206ENST00000539320 NRLP54845 237 aa23.66■■□□□ 1.38
SCARB1-206ENST00000539320 USP46P62068 366 aa23.66■■□□□ 1.38
SCARB1-206ENST00000539320 SCARA5Q6ZMJ2 495 aa23.66■■□□□ 1.38
SCARB1-206ENST00000539320 ZNF518BQ9C0D4 1074 aa23.66■■□□□ 1.38
SCARB1-206ENST00000539320 C2orf78A6NCI8 922 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 CALUO43852 315 aaPredicted RBP23.65■■□□□ 1.38
SCARB1-206ENST00000539320 PAPSS2O95340 614 aaPredicted RBP23.65■■□□□ 1.38
SCARB1-206ENST00000539320 PDE6CP51160 858 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 DPYDQ12882 1025 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 CEP135Q66GS9 1140 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 KRBA2Q6ZNG9 492 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 SYNPOQ8N3V7 929 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 ARL14EPQ8N8R7 260 aaPredicted RBP23.65■■□□□ 1.38
SCARB1-206ENST00000539320 TMC2Q8TDI7 906 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 CYP2S1Q96SQ9 504 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 GOLPH3LQ9H4A5 285 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 TRPM5Q9NZQ8 1165 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 NCDNQ9UBB6 729 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 TRAF3IP3Q9Y228 551 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 FRMD4BQ9Y2L6 1034 aa23.65■■□□□ 1.38
SCARB1-206ENST00000539320 ATP8B3O60423 1300 aa23.64■■□□□ 1.38
SCARB1-206ENST00000539320 OTOL1A6NHN0 477 aaPredicted RBP23.64■■□□□ 1.37
SCARB1-206ENST00000539320 VNN1O95497 513 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 PFKLP17858 780 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 RAP1GAPP47736 663 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 IFNAR2P48551 515 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 CACNA2D1P54289 1103 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 NOP14P78316 857 aaKnown RBP23.64■■□□□ 1.37
SCARB1-206ENST00000539320 DLG4P78352 724 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 ZACNQ401N2 412 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 CPA6Q8N4T0 437 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 TTC16Q8NEE8 873 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 SH3RF2Q8TEC5 729 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 TMEM30AQ9NV96 361 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 ARHGAP26Q9UNA1 814 aa23.64■■□□□ 1.37
SCARB1-206ENST00000539320 HELZP42694 1942 aaKnown RBP23.63■■□□□ 1.37
SCARB1-206ENST00000539320 CLDN5O00501 218 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 P4HA1P13674 534 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 TCF3P15923 654 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 CDH8P55286 799 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 AMPD2Q01433 879 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 TMEM196Q5HYL7 178 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 KIAA2013Q8IYS2 634 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 DCLK2Q8N568 766 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 OSCP1Q8WVF1 389 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 CHFRQ96EP1 664 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 B3GNT5Q9BYG0 378 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 GDPD2Q9HCC8 539 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 DUS2Q9NX74 493 aaKnown RBP23.63■■□□□ 1.37
SCARB1-206ENST00000539320 WNT6Q9Y6F9 365 aa23.63■■□□□ 1.37
SCARB1-206ENST00000539320 MAPK13O15264 365 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 HDCP19113 662 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 PPP3CCP48454 512 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 GRSF1Q12849 480 aaKnown RBP eCLIP23.62■■□□□ 1.37
SCARB1-206ENST00000539320 NFIL3Q16649 462 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 FSTL4Q6MZW2 842 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 FAM35AQ86V20 835 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 ATP2A3Q93084 1043 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 ELMO3Q96BJ8 720 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 TNIP3Q96KP6 325 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 SDCBP2Q9H190 292 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 ECT2Q9H8V3 914 aa23.62■■□□□ 1.37
SCARB1-206ENST00000539320 ZNF840PA6NDX5 716 aa23.61■■□□□ 1.37
SCARB1-206ENST00000539320 K7ESF4 209 aa23.61■■□□□ 1.37
SCARB1-206ENST00000539320 TRDMT1O14717 391 aaKnown RBP23.61■■□□□ 1.37
SCARB1-206ENST00000539320 NR2F2P24468 414 aa23.61■■□□□ 1.37
SCARB1-206ENST00000539320 PIK3CAP42336 1068 aa23.61■■□□□ 1.37
SCARB1-206ENST00000539320 SV2AQ7L0J3 742 aa23.61■■□□□ 1.37
SCARB1-206ENST00000539320 GUF1Q8N442 669 aaKnown RBP23.61■■□□□ 1.37
SCARB1-206ENST00000539320 TAF4BQ92750 862 aa23.61■■□□□ 1.37
SCARB1-206ENST00000539320 SECISBP2LQ93073 1101 aaKnown RBP23.61■■□□□ 1.37
SCARB1-206ENST00000539320 CCDC34Q96HJ3 373 aa23.61■■□□□ 1.37
SCARB1-206ENST00000539320 SLITRK1Q96PX8 696 aa23.61■■□□□ 1.37
SCARB1-206ENST00000539320 CHURC1-FNTBB4DL54 471 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 IKBKBO14920 756 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 ZNF202O95125 648 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 GJA4P35212 333 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 ID4P47928 161 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 FNTBP49356 437 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 VAMP7P51809 220 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 DMWDQ09019 674 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 IFRD2Q12894 506 aaPredicted RBP23.6■■□□□ 1.37
SCARB1-206ENST00000539320 TAF10Q12962 218 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 SGSM1Q2NKQ1 1148 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 EML3Q32P44 896 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 C1orf220Q5T0J3 134 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 EXOC4Q96A65 974 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 MED10Q9BTT4 135 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 C2orf42Q9NWW7 574 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 MAPK8IP1Q9UQF2 711 aa23.6■■□□□ 1.37
SCARB1-206ENST00000539320 AKAP3O75969 853 aa23.59■■□□□ 1.37
SCARB1-206ENST00000539320 ASS1P00966 412 aaKnown RBP23.59■■□□□ 1.37
SCARB1-206ENST00000539320 HLA-DRAP01903 254 aa23.59■■□□□ 1.37
SCARB1-206ENST00000539320 INTS8Q75QN2 995 aaKnown RBP23.59■■□□□ 1.37
SCARB1-206ENST00000539320 NUP93Q8N1F7 819 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms