RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 TSPAN16Q9UKR8 245 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 GINS2Q9Y248 185 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 TCRBV7S3A2A0A539 114 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 GPX6P59796 221 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 EIF3EP60228 445 aaKnown RBP26.09■■□□□ 1.77
RAB40C-204ENST00000538492 SNAPC2Q13487 334 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 ZNF792Q3KQV3 632 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 NPNTQ6UXI9 565 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 C4orf33Q8N1A6 199 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 GPRC5AQ8NFJ5 357 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 KIF12Q96FN5 646 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 KLC4Q9NSK0 619 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.09■■□□□ 1.77
RAB40C-204ENST00000538492 ASNSD1Q9NWL6 643 aa26.09■■□□□ 1.77
RAB40C-204ENST00000538492 H3BRB1 525 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 SSTR1P30872 391 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 RGS7P49802 495 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 WDR4P57081 412 aaKnown RBP26.08■■□□□ 1.77
RAB40C-204ENST00000538492 PPP1R21Q6ZMI0 780 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 PCGF5Q86SE9 256 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 MAGEB18Q96M61 343 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 TRABDQ9H4I3 376 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 TUT1Q9H6E5 874 aaKnown RBP26.08■■□□□ 1.77
RAB40C-204ENST00000538492 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.08■■□□□ 1.774e-8■■■■□ 20
RAB40C-204ENST00000538492 ZNF143P52747 638 aaPredicted RBP26.08■■□□□ 1.77
RAB40C-204ENST00000538492 RBP5P82980 135 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 FAM183BPQ6ZVS7 135 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 NAT8LQ8N9F0 302 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 SPATA18Q8TC71 538 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 ITGA11Q9UKX5 1188 aa26.08■■□□□ 1.77
RAB40C-204ENST00000538492 APOC4-APOC2K7ER74 178 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 APOC2P02655 101 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 RBP3P10745 1247 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 PDGFRAP16234 1089 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 FOXN2P32314 431 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 CDH6P55285 790 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 EFTUD2Q15029 972 aaKnown RBP eCLIP26.07■■□□□ 1.767e-7■■■■■ 38.1
RAB40C-204ENST00000538492 ZC3H18Q86VM9 953 aaKnown RBP26.07■■□□□ 1.76
RAB40C-204ENST00000538492 PYROXD1Q8WU10 500 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 RXFP2Q8WXD0 754 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 CLUHO75153 1309 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 LOC102724159A0A0B4J2E5 919 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 SUN1O94901 812 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 GPD1P21695 349 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 TMEM62Q0P6H9 643 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 MKRN3Q13064 507 aaKnown RBP26.07■■□□□ 1.76
RAB40C-204ENST00000538492 PWP2Q15269 919 aaKnown RBP26.07■■□□□ 1.76
RAB40C-204ENST00000538492 SYCP2LQ5T4T6 812 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 SPATA21Q7Z572 469 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 TDRPQ86YL5 185 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 FUKQ8N0W3 1084 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 SLC12A4Q9UP95 1085 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 KAT6AQ92794 2004 aa26.07■■□□□ 1.76
RAB40C-204ENST00000538492 VGLL3A8MV65 326 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 BASP1P80723 227 aaKnown RBP26.06■■□□□ 1.76
RAB40C-204ENST00000538492 INCA1Q0VD86 236 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 C9orf131Q5VYM1 1079 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 FAM47EQ6ZV65 393 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 FRMD8P1Q9BZ68 369 aaPredicted RBP26.06■■□□□ 1.76
RAB40C-204ENST00000538492 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.06■■□□□ 1.76
RAB40C-204ENST00000538492 C2CD2Q9Y426 696 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 SCN1AP35498 2009 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 A0A1B0GUA9 196 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 MCF2LO15068 1137 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 TMEM63AO94886 807 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 ARL4CP56559 192 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 ATP11AP98196 1134 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 NR1H3Q13133 447 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 PPP1R13LQ8WUF5 828 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 SGSM3Q96HU1 749 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 WDR83Q9BRX9 315 aaKnown RBP26.06■■□□□ 1.76
RAB40C-204ENST00000538492 NT5C1AQ9BXI3 368 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 MAK16Q9BXY0 300 aaKnown RBP26.06■■□□□ 1.76
RAB40C-204ENST00000538492 VTA1Q9NP79 307 aa26.06■■□□□ 1.76
RAB40C-204ENST00000538492 A0A1W2PPM1 405 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 NDC80O14777 642 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 TAC1P20366 129 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 EPHX2P34913 555 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 IL9RQ01113 521 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 KIZQ2M2Z5 673 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 CGB2Q6NT52 195 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 CYP4V2Q6ZWL3 525 aaPredicted RBP26.05■■□□□ 1.76
RAB40C-204ENST00000538492 SUGP1Q8IWZ8 645 aaKnown RBP26.05■■□□□ 1.76
RAB40C-204ENST00000538492 CNPY3Q9BT09 278 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 RSAD1Q9HA92 442 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 C2CD4BA6NLJ0 364 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 DNAJC8O75937 253 aaPredicted RBP26.05■■□□□ 1.76
RAB40C-204ENST00000538492 UBOX5O94941 541 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 PFKMP08237 780 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 MNAT1P51948 309 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 ACAP1Q15027 740 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 GRIK4Q16099 956 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 GOLGA7BQ2TAP0 167 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 MARCH8Q5T0T0 291 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 SMYD5Q6GMV2 418 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 CYB5D1Q6P9G0 228 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 LCLAT1Q6UWP7 414 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 SLC10A4Q96EP9 437 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 SMC6Q96SB8 1091 aa26.05■■□□□ 1.76
RAB40C-204ENST00000538492 RNF19AQ9NV58 838 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms