RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 TMEM8AQ9HCN3 771 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 GKN1Q9NS71 199 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 COMMD8Q9NX08 183 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 NDRG2Q9UN36 371 aaKnown RBP22.83■■□□□ 1.25
CCDC78-215ENST00000538176 NME7Q9Y5B8 376 aa22.83■■□□□ 1.25
CCDC78-215ENST00000538176 KINO60870 393 aaKnown RBP22.82■■□□□ 1.24
CCDC78-215ENST00000538176 CKMP06732 381 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 SP9P0CG40 484 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 TCF3P15923 654 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 HDCP19113 662 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 LRRC63Q05C16 580 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 PDGFRLQ15198 375 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 DGKKQ5KSL6 1271 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 NUP93Q8N1F7 819 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 SYNPOQ8N3V7 929 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 PDZD8Q8NEN9 1154 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 OVCA2Q8WZ82 227 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 SMARCD1Q96GM5 515 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 B3GNT5Q9BYG0 378 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 FAM126AQ9BYI3 521 aaPredicted RBP22.82■■□□□ 1.24
CCDC78-215ENST00000538176 CHRDQ9H2X0 955 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 LMAN1LQ9HAT1 526 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 TICRRQ7Z2Z1 1910 aa22.82■■□□□ 1.24
CCDC78-215ENST00000538176 ZNF638Q14966 1978 aaKnown RBP22.81■■□□□ 1.24
CCDC78-215ENST00000538176 SPECC1L-ADORA2AF8WAN1 911 aa22.81■■□□□ 1.24
CCDC78-215ENST00000538176 TADA3O75528 432 aa22.81■■□□□ 1.24
CCDC78-215ENST00000538176 CTHP32929 405 aa22.81■■□□□ 1.24
CCDC78-215ENST00000538176 GCLMP48507 274 aa22.81■■□□□ 1.24
CCDC78-215ENST00000538176 RUNX3Q13761 415 aa22.81■■□□□ 1.24
CCDC78-215ENST00000538176 FRMD5Q7Z6J6 570 aa22.81■■□□□ 1.24
CCDC78-215ENST00000538176 MED10Q9BTT4 135 aa22.81■■□□□ 1.24
CCDC78-215ENST00000538176 SMG9Q9H0W8 520 aaKnown RBP22.81■■□□□ 1.24
CCDC78-215ENST00000538176 TRPC7Q9HCX4 862 aa22.81■■□□□ 1.24
CCDC78-215ENST00000538176 GTSE1Q9NYZ3 720 aa22.81■■□□□ 1.24
CCDC78-215ENST00000538176 PTPRDP23468 1912 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 CACNA1IQ9P0X4 2223 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 SLC16A3O15427 465 aaKnown RBP22.8■■□□□ 1.24
CCDC78-215ENST00000538176 CHRNB1P11230 501 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 PPP3CAQ08209 521 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 SMYD4Q8IYR2 804 aaPredicted RBP22.8■■□□□ 1.24
CCDC78-215ENST00000538176 STKLD1Q8NE28 680 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 DHTKD1Q96HY7 919 aaPredicted RBP22.8■■□□□ 1.24
CCDC78-215ENST00000538176 ZFYVE19Q96K21 471 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 ZNF518BQ9C0D4 1074 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 DMAP1Q9NPF5 467 aaPredicted RBP22.8■■□□□ 1.24
CCDC78-215ENST00000538176 GCNT4Q9P109 453 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 ARHGAP26Q9UNA1 814 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 CCL26Q9Y258 94 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 GREB1Q4ZG55 1949 aa22.8■■□□□ 1.24
CCDC78-215ENST00000538176 COL4A2P08572 1712 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 ZNF840PA6NDX5 716 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 PSMA7O14818 248 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 YWHAQP27348 245 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 ASPAP45381 313 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 CCR3P51677 355 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 NDST1P52848 882 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 NRLP54845 237 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 INCA1Q0VD86 236 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 SCARA5Q6ZMJ2 495 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 ACOT1Q86TX2 421 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 ADSSL1Q8N142 457 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 CYP2S1Q96SQ9 504 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 SDCBP2Q9H190 292 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 OBSL1O75147 1896 aa22.79■■□□□ 1.24
CCDC78-215ENST00000538176 PRR23AA6NEV1 266 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 TRIM49P0CI25 452 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 TRIM49CP0CI26 452 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 RAP1GAPP47736 663 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 TAF10Q12962 218 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 NR1H3Q13133 447 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 MTF1Q14872 753 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 FAM35AQ86V20 835 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 MAML2Q8IZL2 1156 aaPredicted RBP22.78■■□□□ 1.24
CCDC78-215ENST00000538176 ARL14EPQ8N8R7 260 aaPredicted RBP22.78■■□□□ 1.24
CCDC78-215ENST00000538176 FBXL13Q8NEE6 735 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 TAS1R2Q8TE23 839 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 OSCP1Q8WVF1 389 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 NT5C1AQ9BXI3 368 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 NIF3L1Q9GZT8 377 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 METTL14Q9HCE5 456 aaKnown RBP22.78■■□□□ 1.24
CCDC78-215ENST00000538176 PCDHGA2Q9Y5H1 932 aa22.78■■□□□ 1.24
CCDC78-215ENST00000538176 CLDN5O00501 218 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 MXI1P50539 228 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 USP46P62068 366 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 SLC7A9P82251 487 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 CSTF1Q05048 431 aaKnown RBP22.77■■□□□ 1.24
CCDC78-215ENST00000538176 MTAPQ13126 283 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 ZNF77Q15935 545 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 WDR44Q5JSH3 913 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 ANKRD40Q6AI12 368 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 FOXR2Q6PJQ5 311 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 ZC3H3Q8IXZ2 948 aaKnown RBP22.77■■□□□ 1.24
CCDC78-215ENST00000538176 FUKQ8N0W3 1084 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 SPEM1Q8N4L4 309 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 CPA6Q8N4T0 437 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 ATRIPQ8WXE1 791 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 ATP2A3Q93084 1043 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 FBXO44Q9H4M3 255 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 CSNK1G1Q9HCP0 422 aa22.77■■□□□ 1.24
CCDC78-215ENST00000538176 PRMT8Q9NR22 394 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms