RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 KRT7P08729 469 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 RPL22P35268 128 aaKnown RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 ERFP50548 548 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 PPP2R5DQ14738 602 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 MSS51Q4VC12 460 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 FNBP1LQ5T0N5 605 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 FAM183BPQ6ZVS7 135 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 PLPPR4Q7Z2D5 763 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 XYLT1Q86Y38 959 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 CCDC63Q8NA47 563 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 SERPINB12Q96P63 405 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 RBBP6Q7Z6E9 1792 aaKnown RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 FAM189A1O60320 539 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 UBOX5O94941 541 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 YBX3P16989 372 aaKnown RBP eCLIP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 KRT4P19013 534 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 EIF4BP23588 611 aaKnown RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 GTF2A1P52655 376 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 CCNA1P78396 465 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 ARHGAP1Q07960 439 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 ANKRD20A8PQ5CZ79 823 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 CCDC62Q6P9F0 684 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 ALLCQ8N6M5 410 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 FBF1Q8TES7 1133 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 DNAJB3Q8WWF6 145 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 NT5C1AQ9BXI3 368 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 DPEP3Q9H4B8 488 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 NXF3Q9H4D5 531 aaKnown RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 TNFSF13BQ9Y275 285 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 TIMM13Q9Y5L4 95 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 ASAP2O43150 1006 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 LSM8O95777 96 aaKnown RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 MYL3P08590 195 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 CTSHP09668 335 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 RARBP10826 455 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 TFE3P19532 575 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 CYP2B6P20813 491 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 RPA3P35244 121 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 RBP5P82980 135 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 LAMC2Q13753 1193 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 TCEAL1Q15170 157 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 FAM47CQ5HY64 1035 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 KCNV1Q6PIU1 500 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 RHBDF2Q6PJF5 856 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 VSIG1Q86XK7 387 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 PDIK1LQ8N165 341 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 PPM1NQ8N819 430 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 CCDC110Q8TBZ0 833 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 FAM172AQ8WUF8 416 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 TACO1Q9BSH4 297 aaKnown RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ASNSD1Q9NWL6 643 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 FER1L6Q2WGJ9 1857 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 SIGLEC16A6NMB1 481 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 BTBD19C9JJ37 291 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 SUN1O94901 812 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 HMGCRP04035 888 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 KLRC2P26717 231 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 MSH2P43246 934 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ZNF132P52740 706 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ARL4CP56559 192 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 BCAR1P56945 870 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ROR1Q01973 937 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 CAV1Q03135 178 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 PAN2Q504Q3 1202 aaKnown RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ZNF618Q5T7W0 954 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 PMF1Q6P1K2 205 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ARHGEF18Q6ZSZ5 1173 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 SYDE1Q6ZW31 735 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 TRPM8Q7Z2W7 1104 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 TTC17Q96AE7 1141 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ROPN1BQ9BZX4 212 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 MROH8Q9H579 483 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ROPN1Q9HAT0 212 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 DDX56Q9NY93 547 aaKnown RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ZNF646O15015 1829 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 LTBP3Q9NS15 1303 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ABLIM1O14639 778 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 B4GALT4O60513 344 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 FAM155BO75949 473 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 IL18RAPO95256 599 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ZBED1O96006 694 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 CYP2C9P11712 490 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 GPD1P21695 349 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 SDC4P31431 198 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 IL9RQ01113 521 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 PPIL2Q13356 520 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 STAT4Q14765 748 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 CA9Q16790 459 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 CDCA2Q69YH5 1023 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 MTHFD1LQ6UB35 978 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 CROCCP2Q86T23 111 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 SPATS2Q86XZ4 545 aaKnown RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ZCCHC9Q8N567 271 aaKnown RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ADAM32Q8TC27 787 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 LRRC8CQ8TDW0 803 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 TMEM174Q8WUU8 243 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 ZNF317Q96PQ6 595 aaPredicted RBP9.11□□□□□ -0.95
UBE3B-208ENST00000538070 PEBP4Q96S96 227 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 SLC13A1Q9BZW2 595 aa9.11□□□□□ -0.95
UBE3B-208ENST00000538070 KLC4Q9NSK0 619 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms