RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 SLC23A3Q6PIS1 610 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 SPATA31D4Q6ZUB0 917 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 TAS1R1Q7RTX1 841 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 NEK8Q86SG6 692 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 CDH24Q86UP0 819 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 TMEM143Q96AN5 459 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 ZNF707Q96C28 371 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-207ENST00000537965 ZNF274Q96GC6 653 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-207ENST00000537965 HSPA12BQ96MM6 686 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 CCDC43Q96MW1 224 aaKnown RBP5.88□□□□□ -1.47
SNHG1-207ENST00000537965 SH2D3AQ9BRG2 576 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 IER2Q9BTL4 223 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 TTPALQ9BTX7 342 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 NFKBIZQ9BYH8 718 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 MINDY3Q9H8M7 445 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 SEMA3GQ9NS98 782 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 MARCH5Q9NX47 278 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 ZSCAN32Q9NX65 697 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 RAB23Q9ULC3 237 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 KCNH3Q9ULD8 1083 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 ST14Q9Y5Y6 855 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 NUMBLQ9Y6R0 609 aa5.88□□□□□ -1.47
SNHG1-207ENST00000537965 DENND4CQ5VZ89 1909 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 TICRRQ7Z2Z1 1910 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 MED19A0JLT2 244 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 UPK3BL1B0FP48 263 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 UPK3BL2E5RIL1 263 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 MAN2B1O00754 1011 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 ADAMTS3O15072 1205 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 EPB41L2O43491 1005 aaKnown RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 TRAPPC3O43617 180 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 EDIL3O43854 480 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 B4GALT3O60512 393 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 FOXD2O60548 495 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 CCNT1O60563 726 aaKnown RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 TSPAN1O60635 241 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 THP07101 528 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 XRCC6P12956 609 aaKnown RBP eCLIP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 ARF4P18085 180 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 HSPA4P34932 840 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 ETV3P41162 512 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 RPS9P46781 194 aaKnown RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 SCNN1GP51170 649 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 YARSP54577 528 aaKnown RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 GPC5P78333 572 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 CCT2P78371 535 aaKnown RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 IKZF1Q13422 519 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 TUSC3Q13454 348 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 SNW1Q13573 536 aaKnown RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 HSP90AA2PQ14568 343 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 UBXN2BQ14CS0 331 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 INF2Q27J81 1249 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 CDKAL1Q5VV42 579 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 FBXL19Q6PCT2 694 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 ZNF852Q6ZMS4 543 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 APBB1IPQ7Z5R6 666 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 GRASPQ7Z6J2 395 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 CEP57Q86XR8 500 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 TPH2Q8IWU9 490 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 SUMF1Q8NBK3 374 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 DNAJB8Q8NHS0 232 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 CYB5D2Q8WUJ1 264 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 FGF13Q92913 245 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 GJA10Q969M2 543 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 ADPGKQ9BRR6 497 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 LXNQ9BS40 222 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 RTKNQ9BST9 563 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 DDX23Q9BUQ8 820 aaKnown RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 PHF20Q9BVI0 1012 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 APOL6Q9BWW8 343 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 EIF2AQ9BY44 585 aaKnown RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 GPR62Q9BZJ7 368 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 KCNMB3Q9NPA1 279 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 ANKEF1Q9NU02 776 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 PRMT7Q9NVM4 692 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 GDE1Q9NZC3 331 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 FBXW11Q9UKB1 542 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 GMEB2Q9UKD1 530 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 POLR3KQ9Y2Y1 108 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 RNF114Q9Y508 228 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 KIF26AQ9ULI4 1882 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-207ENST00000537965 NUP205Q92621 2012 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 PCNX2A6NKB5 2137 aa5.87□□□□□ -1.47
SNHG1-207ENST00000537965 MYO18AQ92614 2054 aaKnown RBP5.86□□□□□ -1.47
SNHG1-207ENST00000537965 TCHHQ07283 1943 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 A0A1B0GUA9 196 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 BIN1O00499 593 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 ZNF197O14709 1029 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 N4BP3O15049 544 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 GREM1O60565 184 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 LRP3O75074 770 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 ECI2O75521 394 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 LYPLA2O95372 231 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 CBX7O95931 251 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 C8AP07357 584 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 MYBP10242 640 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 ELF1P32519 619 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 EIF4A3P38919 411 aaKnown RBP5.86□□□□□ -1.47
SNHG1-207ENST00000537965 TXKP42681 527 aa5.86□□□□□ -1.47
SNHG1-207ENST00000537965 RBM25P49756 843 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms