RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CAPN9O14815 690 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 MAP3K7O43318 606 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 BANF1O75531 89 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 KRT7P08729 469 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 RARBP10826 455 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 GNAT1P11488 350 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 PTPRAP18433 802 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 SERPINB3P29508 390 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 GCLCP48506 637 aaPredicted RBP12.71□□□□□ -0.37
CPSF7-218ENST00000537641 AP3M2P53677 418 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 OTUD4Q01804 1114 aaKnown RBP12.71□□□□□ -0.37
CPSF7-218ENST00000537641 PLCB3Q01970 1234 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 OGDHQ02218 1023 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 BAATQ14032 418 aaPredicted RBP12.71□□□□□ -0.37
CPSF7-218ENST00000537641 RCN2Q14257 317 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 TAZQ16635 292 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 ANKRD22Q5VYY1 191 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 OR52E8Q6IFG1 317 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 RINLQ6ZS11 566 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 THNSL1Q8IYQ7 743 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 GALNT15Q8N3T1 639 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 REPS2Q8NFH8 660 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 HAUS1Q96CS2 278 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 OXNAD1Q96HP4 312 aaPredicted RBP12.71□□□□□ -0.37
CPSF7-218ENST00000537641 WDR83Q9BRX9 315 aaKnown RBP12.71□□□□□ -0.37
CPSF7-218ENST00000537641 CCDC28BQ9BUN5 200 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 MAF1Q9H063 256 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 DLGAP2Q9P1A6 1054 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 CNTN3Q9P232 1028 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 ADAMTS5Q9UNA0 930 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 NUB1Q9Y5A7 615 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 GJA3Q9Y6H8 435 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 WDR90Q96KV7 1748 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 LCTP09848 1927 aa12.71□□□□□ -0.37
CPSF7-218ENST00000537641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.71□□□□□ -0.38
CPSF7-218ENST00000537641 C3orf70A6NLC5 250 aaPredicted RBP12.71□□□□□ -0.38
CPSF7-218ENST00000537641 C19orf81C9J6K1 198 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 F8VP50 259 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 GOLGA8SH3BPF8 625 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 GOLGA8MH3BSY2 632 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 ZNF862O60290 1169 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 PSAPP07602 524 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 NR3C2P08235 984 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 DLDP09622 509 aaKnown RBP12.71□□□□□ -0.38
CPSF7-218ENST00000537641 RPL22P35268 128 aaKnown RBP12.71□□□□□ -0.38
CPSF7-218ENST00000537641 WNT7BP56706 349 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 SESN3P58005 492 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 PTK7Q13308 1070 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 MSS51Q4VC12 460 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 SNRNP48Q6IEG0 339 aaKnown RBP12.71□□□□□ -0.38
CPSF7-218ENST00000537641 LRRC6Q86X45 466 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 CCDC110Q8TBZ0 833 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 ACTL9Q8TC94 416 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 NRG4Q8WWG1 115 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 SLC44A1Q8WWI5 657 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 RSAD2Q8WXG1 361 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 APBB2Q92870 758 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 PTPRN2Q92932 1015 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 WNK4Q96J92 1243 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 FAM84AQ96KN4 292 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 NR1H4Q96RI1 486 aaPredicted RBP12.71□□□□□ -0.38
CPSF7-218ENST00000537641 WRNIP1Q96S55 665 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 IMPG2Q9BZV3 1241 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 FAM192AQ9GZU8 254 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 PAPOLBQ9NRJ5 636 aaKnown RBP12.71□□□□□ -0.38
CPSF7-218ENST00000537641 KCNK4Q9NYG8 393 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 TAS2R1Q9NYW7 299 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 PDP2Q9P2J9 529 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 DNAJB4Q9UDY4 337 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 PCDHGC3Q9UN70 934 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 AGTPBP1Q9UPW5 1226 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 RIPK3Q9Y572 518 aa12.71□□□□□ -0.38
CPSF7-218ENST00000537641 ANKRD33BA6NCL7 494 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 FCHO1O14526 889 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 TBX10O75333 385 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 TMEM63AO94886 807 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 SSTR3P32745 418 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-218ENST00000537641 RFC5P40937 340 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 SOX10P56693 466 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 SLC25A11Q02978 314 aaKnown RBP12.7□□□□□ -0.38
CPSF7-218ENST00000537641 TBCCQ15814 346 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 HADHQ16836 314 aaKnown RBP12.7□□□□□ -0.38
CPSF7-218ENST00000537641 BBS9Q3SYG4 887 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 WDR78Q5VTH9 848 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 TXNRD3NBQ6F5E7 133 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 NET1Q7Z628 596 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-218ENST00000537641 ZC3H18Q86VM9 953 aaKnown RBP12.7□□□□□ -0.38
CPSF7-218ENST00000537641 SESTD1Q86VW0 696 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 TMPRSS6Q8IU80 811 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 PDCD7Q8N8D1 485 aaKnown RBP12.7□□□□□ -0.38
CPSF7-218ENST00000537641 NSUN6Q8TEA1 469 aaKnown RBP12.7□□□□□ -0.38
CPSF7-218ENST00000537641 FNIP1Q8TF40 1166 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 ZBTB10Q96DT7 871 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 C7orf26Q96N11 449 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 PNPLA8Q9NP80 782 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 CYP26B1Q9NR63 512 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 MKS1Q9NXB0 559 aa12.7□□□□□ -0.38
CPSF7-218ENST00000537641 CPSF2Q9P2I0 782 aaKnown RBP12.7□□□□□ -0.38
CPSF7-218ENST00000537641 SEPT9Q9UHD8 586 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-218ENST00000537641 XPO7Q9UIA9 1087 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms