RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 TTC8Q8TAM2 541 aa14.05□□□□□ -0.16
MRPS35-202ENST00000536569 TMC2Q8TDI7 906 aa14.05□□□□□ -0.16
MRPS35-202ENST00000536569 TAF4BQ92750 862 aa14.05□□□□□ -0.16
MRPS35-202ENST00000536569 CCDC47Q96A33 483 aaKnown RBP14.05□□□□□ -0.16
MRPS35-202ENST00000536569 TNIP3Q96KP6 325 aa14.05□□□□□ -0.16
MRPS35-202ENST00000536569 KCTD10Q9H3F6 313 aa14.05□□□□□ -0.16
MRPS35-202ENST00000536569 EBF3Q9H4W6 596 aa14.05□□□□□ -0.16
MRPS35-202ENST00000536569 TRPC7Q9HCX4 862 aa14.05□□□□□ -0.16
MRPS35-202ENST00000536569 RBM12Q9NTZ6 932 aaKnown RBP14.05□□□□□ -0.16
MRPS35-202ENST00000536569 DUS2Q9NX74 493 aaKnown RBP14.05□□□□□ -0.16
MRPS35-202ENST00000536569 GMEB2Q9UKD1 530 aa14.05□□□□□ -0.16
MRPS35-202ENST00000536569 WDR87Q6ZQQ6 2873 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 A0A1B0GVL5 298 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 A0A1W2PQ27 194 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 A0A1W2PQ64 194 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 A0A1W2PQD8 194 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 A8MXQ7 604 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 CHURC1-FNTBB4DL54 471 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 LRP3O75074 770 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 C4BPAP04003 597 aaKnown RBP14.04□□□□□ -0.16
MRPS35-202ENST00000536569 P4HA1P13674 534 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 SYKP43405 635 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 ENPEPQ07075 957 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 BIRC3Q13489 604 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 PUM1Q14671 1186 aaKnown RBP eCLIP14.04□□□□□ -0.16
MRPS35-202ENST00000536569 NFIL3Q16649 462 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 SGSM1Q2NKQ1 1148 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 ZNF699Q32M78 642 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 ZNF667Q5HYK9 610 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 TDRD10Q5VZ19 366 aaKnown RBP14.04□□□□□ -0.16
MRPS35-202ENST00000536569 Q6ZS52 159 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 ARL14EPQ8N8R7 260 aaPredicted RBP14.04□□□□□ -0.16
MRPS35-202ENST00000536569 SPRYD3Q8NCJ5 442 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 STKLD1Q8NE28 680 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 OVCA2Q8WZ82 227 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 CYP2S1Q96SQ9 504 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 ECT2Q9H8V3 914 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 NXF1Q9UBU9 619 aaKnown RBP14.04□□□□□ -0.16
MRPS35-202ENST00000536569 TRAF3IP3Q9Y228 551 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 FRMD4BQ9Y2L6 1034 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 ATP8B3O60423 1300 aa14.04□□□□□ -0.16
MRPS35-202ENST00000536569 ZNF638Q14966 1978 aaKnown RBP14.03□□□□□ -0.16
MRPS35-202ENST00000536569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.03□□□□□ -0.16
MRPS35-202ENST00000536569 C2orf78A6NCI8 922 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 ZNF840PA6NDX5 716 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 OTOL1A6NHN0 477 aaPredicted RBP14.03□□□□□ -0.16
MRPS35-202ENST00000536569 LRRIQ3A6PVS8 624 aaPredicted RBP14.03□□□□□ -0.16
MRPS35-202ENST00000536569 PRR5-ARHGAP8B1AHC4 643 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 F8VP50 259 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 CALUO43852 315 aaPredicted RBP14.03□□□□□ -0.16
MRPS35-202ENST00000536569 RHOBTB3O94955 611 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 RTN3O95197 1032 aaPredicted RBP14.03□□□□□ -0.16
MRPS35-202ENST00000536569 NR3C1P04150 777 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 GJA4P35212 333 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 IFNAR2P48551 515 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 SLC7A9P82251 487 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 ARHGAP8P85298 464 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 NCOA4Q13772 614 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 TRIM68Q6AZZ1 485 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 FSTL4Q6MZW2 842 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 WDR5BQ86VZ2 330 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 DCLK2Q8N568 766 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 PDZD8Q8NEN9 1154 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 RIN3Q8TB24 985 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 PLEKHO2Q8TD55 490 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 SH3RF2Q8TEC5 729 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 CHFRQ96EP1 664 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 CCDC34Q96HJ3 373 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 SLITRK1Q96PX8 696 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 SLC22A12Q96S37 553 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 P2RY13Q9BPV8 354 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 COMMD8Q9NX08 183 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 DLL3Q9NYJ7 618 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 ZDHHC9Q9Y397 364 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 PTPRDP23468 1912 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 GREB1Q4ZG55 1949 aa14.03□□□□□ -0.16
MRPS35-202ENST00000536569 FRYLO94915 3013 aa14.02□□□□□ -0.16
MRPS35-202ENST00000536569 SLC9A3R1O14745 358 aaPredicted RBP14.02□□□□□ -0.17
MRPS35-202ENST00000536569 FOXD2O60548 495 aaPredicted RBP14.02□□□□□ -0.17
MRPS35-202ENST00000536569 NFATC1O95644 943 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 OLFM2O95897 454 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 RETP07949 1114 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 ARSAP15289 507 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 CASP4P49662 377 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 GALK1P51570 392 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 USP46P62068 366 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 LMNB2Q03252 620 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 EML3Q32P44 896 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 ZACNQ401N2 412 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 DDX42Q86XP3 938 aaKnown RBP eCLIP14.02□□□□□ -0.17
MRPS35-202ENST00000536569 NUP93Q8N1F7 819 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 CAMKK1Q8N5S9 505 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 RMDN1Q96DB5 314 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 B3GNT5Q9BYG0 378 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 DPEP3Q9H4B8 488 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 NME7Q9Y5B8 376 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 GPR179Q6PRD1 2367 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 ANAPC1Q9H1A4 1944 aa14.02□□□□□ -0.17
MRPS35-202ENST00000536569 HRO43593 1189 aa14.01□□□□□ -0.17
MRPS35-202ENST00000536569 VNN1O95497 513 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms