RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 GOLGA6AQ9NYA3 693 aa23.85■■□□□ 1.41
HMGA2-206ENST00000536545 MTRF1LQ9UGC7 380 aaKnown RBP23.85■■□□□ 1.41
HMGA2-206ENST00000536545 ASIC3Q9UHC3 531 aa23.85■■□□□ 1.41
HMGA2-206ENST00000536545 EFR3BQ9Y2G0 817 aa23.85■■□□□ 1.41
HMGA2-206ENST00000536545 DNAH12Q6ZR08 3092 aa23.84■■□□□ 1.41
HMGA2-206ENST00000536545 RPL34P49207 117 aaKnown RBP23.84■■□□□ 1.41
HMGA2-206ENST00000536545 TRIM71Q2Q1W2 868 aaKnown RBP23.84■■□□□ 1.41
HMGA2-206ENST00000536545 GLIPR1L2Q4G1C9 344 aa23.84■■□□□ 1.41
HMGA2-206ENST00000536545 MRPL10Q7Z7H8 261 aaKnown RBP23.84■■□□□ 1.41
HMGA2-206ENST00000536545 SNF8Q96H20 258 aa23.84■■□□□ 1.41
HMGA2-206ENST00000536545 GAD1Q99259 594 aa23.84■■□□□ 1.41
HMGA2-206ENST00000536545 EPB41L4BQ9H329 900 aa23.84■■□□□ 1.41
HMGA2-206ENST00000536545 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.84■■□□□ 1.41
HMGA2-206ENST00000536545 DDX20Q9UHI6 824 aaKnown RBP23.84■■□□□ 1.41
HMGA2-206ENST00000536545 ATP8A1Q9Y2Q0 1164 aa23.84■■□□□ 1.41
HMGA2-206ENST00000536545 PAPSS1O43252 624 aaPredicted RBP23.83■■□□□ 1.41
HMGA2-206ENST00000536545 RNF8O76064 485 aa23.83■■□□□ 1.41
HMGA2-206ENST00000536545 TRUB2O95900 331 aaKnown RBP23.83■■□□□ 1.41
HMGA2-206ENST00000536545 ADORA2BP29275 332 aa23.83■■□□□ 1.41
HMGA2-206ENST00000536545 ZNF844Q08AG5 666 aa23.83■■□□□ 1.41
HMGA2-206ENST00000536545 DEFB115Q30KQ5 88 aa23.83■■□□□ 1.41
HMGA2-206ENST00000536545 CYP4V2Q6ZWL3 525 aaPredicted RBP23.83■■□□□ 1.41
HMGA2-206ENST00000536545 CD99L2Q8TCZ2 262 aa23.83■■□□□ 1.41
HMGA2-206ENST00000536545 LPPQ93052 612 aa23.83■■□□□ 1.41
HMGA2-206ENST00000536545 PEBP4Q96S96 227 aa23.83■■□□□ 1.41
HMGA2-206ENST00000536545 TRAIPQ9BWF2 469 aa23.83■■□□□ 1.41
HMGA2-206ENST00000536545 DNAI2Q9GZS0 605 aa23.83■■□□□ 1.41
HMGA2-206ENST00000536545 GIT1Q9Y2X7 761 aa23.83■■□□□ 1.41
HMGA2-206ENST00000536545 FAM163BP0C2L3 166 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 PDGFRAP16234 1089 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 CD52P31358 61 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 SLC6A3Q01959 620 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 CALCOCO2Q13137 446 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 PTK7Q13308 1070 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 DSC3Q14574 896 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 KCNT1Q5JUK3 1230 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 RHBDF2Q6PJF5 856 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 AGMOQ6ZNB7 445 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 ZDHHC17Q8IUH5 632 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 CMASQ8NFW8 434 aaPredicted RBP23.83■■□□□ 1.4
HMGA2-206ENST00000536545 KHSRPQ92945 711 aaKnown RBP eCLIP23.83■■□□□ 1.42e-7■■■□□ 15.7
HMGA2-206ENST00000536545 TNIP3Q96KP6 325 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 TSPYL2Q9H2G4 693 aaPredicted RBP23.83■■□□□ 1.4
HMGA2-206ENST00000536545 CYLDQ9NQC7 956 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 PADI3Q9ULW8 664 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 USP18Q9UMW8 372 aa23.83■■□□□ 1.4
HMGA2-206ENST00000536545 MGEA5O60502 916 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 TOMM70O94826 608 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 GHRP10912 638 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 ATF2P15336 505 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 KDELR1P24390 212 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 TKTP29401 623 aaKnown RBP23.82■■□□□ 1.4
HMGA2-206ENST00000536545 AFF1P51825 1210 aaKnown RBP23.82■■□□□ 1.4
HMGA2-206ENST00000536545 PMS2P54278 862 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 SNX16P57768 344 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 DMTNQ08495 405 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 CEP85LQ5SZL2 805 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 OR2W6PQ8NHA6 318 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 FAM76AQ8TAV0 307 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 PCSK1NQ9UHG2 260 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 DNPEPQ9ULA0 475 aa23.82■■□□□ 1.4
HMGA2-206ENST00000536545 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.82■■□□□ 1.4
HMGA2-206ENST00000536545 ARL5CA6NH57 179 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 CYB561D2O14569 222 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 GRAP2O75791 330 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 CAPN15O75808 1086 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 CABYRO75952 493 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 ITIH2P19823 946 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 IGFBP6P24592 240 aaPredicted RBP23.81■■□□□ 1.4
HMGA2-206ENST00000536545 KLRC2P26717 231 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 SCNN1AP37088 669 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 RAB27AP51159 221 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 ITGA7Q13683 1181 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 BYSLQ13895 437 aaKnown RBP23.81■■□□□ 1.4
HMGA2-206ENST00000536545 LPIN1Q14693 890 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 C15orf59Q2T9L4 293 aaPredicted RBP23.81■■□□□ 1.4
HMGA2-206ENST00000536545 CCDC14Q49A88 953 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 FAM26DQ5JW98 314 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 SH3PXD2AQ5TCZ1 1133 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 BBS12Q6ZW61 710 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 B3GALNT2Q8NCR0 500 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 SLC2A14Q8TDB8 520 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 NKD2Q969F2 451 aaPredicted RBP23.81■■□□□ 1.4
HMGA2-206ENST00000536545 TRMT13Q9NUP7 481 aaKnown RBP23.81■■□□□ 1.4
HMGA2-206ENST00000536545 MIOSQ9NXC5 875 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 CACNG4Q9UBN1 327 aa23.81■■□□□ 1.4
HMGA2-206ENST00000536545 GABRDO14764 452 aa23.8■■□□□ 1.4
HMGA2-206ENST00000536545 ZNF623O75123 536 aa23.8■■□□□ 1.4
HMGA2-206ENST00000536545 THP07101 528 aa23.8■■□□□ 1.4
HMGA2-206ENST00000536545 HOXD10P28358 340 aa23.8■■□□□ 1.4
HMGA2-206ENST00000536545 VCPP55072 806 aaKnown RBP23.8■■□□□ 1.4
HMGA2-206ENST00000536545 LMNB2Q03252 620 aa23.8■■□□□ 1.4
HMGA2-206ENST00000536545 TAF5Q15542 800 aa23.8■■□□□ 1.4
HMGA2-206ENST00000536545 TRIP13Q15645 432 aaPredicted RBP23.8■■□□□ 1.4
HMGA2-206ENST00000536545 OASLQ15646 514 aaKnown RBP23.8■■□□□ 1.4
HMGA2-206ENST00000536545 RAB6CQ53S08 254 aa23.8■■□□□ 1.4
HMGA2-206ENST00000536545 RNF180Q86T96 592 aa23.8■■□□□ 1.4
HMGA2-206ENST00000536545 RAB6CQ9H0N0 254 aa23.8■■□□□ 1.4
HMGA2-206ENST00000536545 PABPC3Q9H361 631 aaKnown RBP23.8■■□□□ 1.4
HMGA2-206ENST00000536545 TMBIM4Q9HC24 238 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms