RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 ZNF564Q8TBZ8 553 aaPredicted RBP22.48■■□□□ 1.19
TRIM3-214ENST00000536344 ZFAND2BQ8WV99 257 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 DNAJB3Q8WWF6 145 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 SLC7A6OSQ96CW6 309 aaPredicted RBP22.48■■□□□ 1.19
TRIM3-214ENST00000536344 RBM41Q96IZ5 413 aaKnown RBP22.48■■□□□ 1.19
TRIM3-214ENST00000536344 PAIP2Q9BPZ3 127 aaKnown RBP22.48■■□□□ 1.19
TRIM3-214ENST00000536344 APOL6Q9BWW8 343 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 CDC42EP4Q9H3Q1 356 aaKnown RBP22.48■■□□□ 1.19
TRIM3-214ENST00000536344 TTC7AQ9ULT0 858 aaPredicted RBP22.48■■□□□ 1.19
TRIM3-214ENST00000536344 ZC3H11AO75152 810 aaKnown RBP eCLIP22.48■■□□□ 1.19
TRIM3-214ENST00000536344 ASS1P00966 412 aaKnown RBP22.48■■□□□ 1.19
TRIM3-214ENST00000536344 ITGB3P05106 788 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 RRM1P23921 792 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 CLEC16AQ2KHT3 1053 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 ZNF699Q32M78 642 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 RFWD3Q6PCD5 774 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 IFT43Q96FT9 208 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 PCDHB2Q9Y5E7 798 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 ZSWIM8A7E2V4 1837 aa22.48■■□□□ 1.19
TRIM3-214ENST00000536344 MYADML2A6NDP7 307 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 TSPAN1O60635 241 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 T-ENOLP0DO92 83 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 COMTP21964 271 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 WDR72Q3MJ13 1102 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 FAM187AA6NFU0 413 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 TREHO43280 583 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 RCN2Q14257 317 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 ACAD10Q6JQN1 1059 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 CYP4F22Q6NT55 531 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 DPH6Q7L8W6 267 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.47■■□□□ 1.19
TRIM3-214ENST00000536344 KCNN1Q92952 543 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 VTI1AQ96AJ9 217 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 PWWP2AQ96N64 755 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 LRMDAQ9H2I8 198 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 SLCO1B3Q9NPD5 702 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 CISHQ9NSE2 258 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 TRPM7Q96QT4 1865 aa22.47■■□□□ 1.19
TRIM3-214ENST00000536344 ACADSP16219 412 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 CUL3Q13618 768 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 KHDC1Q4VXA5 237 aaKnown RBP22.46■■□□□ 1.19
TRIM3-214ENST00000536344 MFSD5Q6N075 450 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 TRIM74Q86UV6 250 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 TRIM73Q86UV7 250 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 C1orf127Q8N9H9 656 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 DDX50Q9BQ39 737 aaKnown RBP22.46■■□□□ 1.19
TRIM3-214ENST00000536344 TMEM109Q9BVC6 243 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 MTRF1LQ9UGC7 380 aaKnown RBP22.46■■□□□ 1.19
TRIM3-214ENST00000536344 SIX4Q9UIU6 781 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 A6NJR5 290 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 CYP2C9P11712 490 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 RARGP13631 454 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 TAC1P20366 129 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 TRIM32Q13049 653 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 SLC10A6Q3KNW5 377 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 GLRA4Q5JXX5 417 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 RNF43Q68DV7 783 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 CCDC137Q6PK04 289 aaKnown RBP22.46■■□□□ 1.19
TRIM3-214ENST00000536344 ENOSF1Q7L5Y1 443 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 APBB1IPQ7Z5R6 666 aaPredicted RBP22.46■■□□□ 1.19
TRIM3-214ENST00000536344 PRUNE1Q86TP1 453 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 ZSWIM1Q9BR11 485 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 PITPNM3Q9BZ71 974 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 GJD2Q9UKL4 321 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 ANK1P16157 1881 aa22.46■■□□□ 1.19
TRIM3-214ENST00000536344 TNNC2P02585 160 aa22.45■■□□□ 1.19
TRIM3-214ENST00000536344 SLC10A3P09131 477 aa22.45■■□□□ 1.19
TRIM3-214ENST00000536344 GZMAP12544 262 aa22.45■■□□□ 1.19
TRIM3-214ENST00000536344 DHX34Q14147 1143 aaKnown RBP22.45■■□□□ 1.19
TRIM3-214ENST00000536344 NRG4Q8WWG1 115 aa22.45■■□□□ 1.19
TRIM3-214ENST00000536344 ANKRD36BP1Q96IX9 119 aa22.45■■□□□ 1.19
TRIM3-214ENST00000536344 EIF2AQ9BY44 585 aaKnown RBP22.45■■□□□ 1.19
TRIM3-214ENST00000536344 GABRQQ9UN88 632 aa22.45■■□□□ 1.19
TRIM3-214ENST00000536344 FAM155AB1AL88 458 aaPredicted RBP22.45■■□□□ 1.18
TRIM3-214ENST00000536344 C6orf222P0C671 652 aaPredicted RBP22.45■■□□□ 1.18
TRIM3-214ENST00000536344 UNGP13051 313 aaPredicted RBP22.45■■□□□ 1.18
TRIM3-214ENST00000536344 CHKAP35790 457 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 SKIV2L2P42285 1042 aaKnown RBP22.45■■□□□ 1.18
TRIM3-214ENST00000536344 CAP1Q01518 475 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 MTFR1Q15390 333 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 PARP6Q2NL67 630 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 RHOT2Q8IXI1 618 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 SRRM1Q8IYB3 904 aaKnown RBP22.45■■□□□ 1.18
TRIM3-214ENST00000536344 TMEM40Q8WWA1 233 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 ZNF333Q96JL9 665 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 ANKRD27Q96NW4 1050 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 STMN4Q9H169 189 aaPredicted RBP22.45■■□□□ 1.18
TRIM3-214ENST00000536344 XYLT2Q9H1B5 865 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 CARD9Q9H257 536 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 AAASQ9NRG9 546 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 TXLNGQ9NUQ3 528 aa22.45■■□□□ 1.18
TRIM3-214ENST00000536344 DRG2P55039 364 aaKnown RBP22.44■■□□□ 1.18
TRIM3-214ENST00000536344 DNAJC3Q13217 504 aa22.44■■□□□ 1.18
TRIM3-214ENST00000536344 MFSD10Q14728 455 aa22.44■■□□□ 1.18
TRIM3-214ENST00000536344 ZFYVE28Q9HCC9 887 aa22.44■■□□□ 1.18
TRIM3-214ENST00000536344 HMGXB4Q9UGU5 601 aa22.44■■□□□ 1.18
TRIM3-214ENST00000536344 RASAL2Q9UJF2 1139 aa22.44■■□□□ 1.18
TRIM3-214ENST00000536344 ANAPC7Q9UJX3 599 aa22.44■■□□□ 1.18
TRIM3-214ENST00000536344 LAMA2P24043 3122 aaKnown RBP22.44■■□□□ 1.18
TRIM3-214ENST00000536344 SPOPO43791 374 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms