RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ACSL4O60488 711 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 UGT1A9O60656 530 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 CBFA2T3O75081 653 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 CD1EP15812 388 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 UGT1A6P19224 532 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 MAGP20916 626 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 UGT1A1P22309 533 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 UGT1A4P22310 534 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ADORA1P30542 326 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 EPHX2P34913 555 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 UGT1A3P35503 534 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 UGT1A5P35504 534 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 UBA7P41226 1012 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ZAP70P43403 619 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 RPIAP49247 311 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 GPC3P51654 580 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 TPTEP56180 551 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 CDKL1Q00532 357 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 KLHL30Q0D2K2 578 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 SEPT6Q14141 434 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 GRM2Q14416 872 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 SPARCL1Q14515 664 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ARHGEF6Q15052 776 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 RASA2Q15283 850 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 FAM83BQ5T0W9 1011 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 C4orf22Q6V702 233 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 TMTC3Q6ZXV5 915 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ZNF571Q7Z3V5 609 aaPredicted RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 SFR1Q86XK3 245 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 NAT16Q8N8M0 369 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 NPLOC4Q8TAT6 608 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ALG3Q92685 438 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 SKA1Q96BD8 255 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 TAMM41Q96BW9 452 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 NSL1Q96IY1 281 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 OSBPL6Q9BZF3 934 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 MTMR12Q9C0I1 747 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 NMUR2Q9GZQ4 415 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 IRF2BPLQ9H1B7 796 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 TP63Q9H3D4 680 aaPredicted RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 TLE6Q9H808 572 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 UGT1A7Q9HAW7 530 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 UGT1A10Q9HAW8 530 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 UGT1A8Q9HAW9 530 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PLGRKTQ9HBL7 147 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 C12orf4Q9NQ89 552 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 CCDC177Q9NQR7 707 aaPredicted RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 USP40Q9NVE5 1235 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 TBCCD1Q9NVR7 557 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 FAM198AQ9UFP1 575 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ANGPTL2Q9UKU9 493 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 HDAC9Q9UKV0 1011 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ZMIZ1Q9ULJ6 1067 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 EXOC7Q9UPT5 735 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 FAM237BA0A1B0GVD1 139 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 A0A1W2PPW3 197 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 RSPH10B2B2RC85 870 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PSMA7O14818 248 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 MCF2LO15068 1137 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 THAP12O43422 761 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ITM2AO43736 263 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 EDF1O60869 148 aaKnown RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 BANF1O75531 89 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 DGAT1O75907 488 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ATE1O95260 518 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 KRT75O95678 551 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 DDX58O95786 925 aaKnown RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 IGKV5-2P06315 115 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 IFIT1P09914 478 aaKnown RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 RSPH10BP0C881 870 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ADRA1DP25100 572 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 IFNA8P32881 189 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PHKA2P46019 1235 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 VEGFBP49765 207 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 C21orf59P57076 290 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ASIC1P78348 528 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 OTUD4Q01804 1114 aaKnown RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 CENPCQ03188 943 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PTPN12Q05209 780 aaKnown RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 NR1H3Q13133 447 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 NME3Q13232 169 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 NOGQ13253 232 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ACVR2BQ13705 512 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ERFEQ4G0M1 354 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ANKRD20A4Q4UJ75 823 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 LRRC24Q50LG9 513 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 TNFAIP8L3Q5GJ75 292 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 RABGAP1LQ5R372 815 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PXDC1Q5TGL8 231 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 AGAP9Q5VTM2 703 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 ULK2Q8IYT8 1036 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 TAB3Q8N5C8 712 aaPredicted RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 LRRC57Q8N9N7 239 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 SPERTQ8NA61 448 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 MIGA1Q8NAN2 632 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 OR7G1Q8NGA0 311 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 TPCN2Q8NHX9 752 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PYROXD1Q8WU10 500 aa3.89□□□□□ -1.79
MCF2-210ENST00000536274 PDCD6IPQ8WUM4 868 aaKnown RBP3.89□□□□□ -1.79
MCF2-210ENST00000536274 C1orf54Q8WWF1 131 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms