RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SMARCD2Q92925 531 aa14.36□□□□□ -0.11
RPAIN-205ENST00000536255 SMARCD1Q96GM5 515 aa14.36□□□□□ -0.11
RPAIN-205ENST00000536255 HEXIM2Q96MH2 286 aaKnown RBP14.36□□□□□ -0.11
RPAIN-205ENST00000536255 ZSWIM3Q96MP5 696 aa14.36□□□□□ -0.11
RPAIN-205ENST00000536255 ASB16Q96NS5 453 aa14.36□□□□□ -0.11
RPAIN-205ENST00000536255 GPR88Q9GZN0 384 aa14.36□□□□□ -0.11
RPAIN-205ENST00000536255 SLITRK6Q9H5Y7 841 aa14.36□□□□□ -0.11
RPAIN-205ENST00000536255 SLC2A4RGQ9NR83 387 aa14.36□□□□□ -0.11
RPAIN-205ENST00000536255 FBXL21Q9UKT6 434 aa14.36□□□□□ -0.11
RPAIN-205ENST00000536255 PCDHB4Q9Y5E5 795 aa14.36□□□□□ -0.11
RPAIN-205ENST00000536255 PDGFBP01127 241 aaPredicted RBP14.35□□□□□ -0.11
RPAIN-205ENST00000536255 CFHP08603 1231 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 PAEPP09466 180 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 CSH1P0DML2 217 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 CSH2P0DML3 217 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 ATP1A3P13637 1013 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 HMGA1P17096 107 aaKnown RBP14.35□□□□□ -0.11
RPAIN-205ENST00000536255 COL9A1P20849 921 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 CDC25CP30307 473 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 RAD23BP54727 409 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 ZNF445P59923 1031 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 UBXN1Q04323 297 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 ORC1Q13415 861 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 ARHGAP15Q53QZ3 475 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 SDHAF4Q5VUM1 108 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 SCN4BQ8IWT1 228 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 SUGP1Q8IWZ8 645 aaKnown RBP14.35□□□□□ -0.11
RPAIN-205ENST00000536255 UBR7Q8N806 425 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 SLC4A11Q8NBS3 891 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 STKLD1Q8NE28 680 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 ZSCAN18Q8TBC5 510 aaPredicted RBP14.35□□□□□ -0.11
RPAIN-205ENST00000536255 ELSPBP1Q96BH3 223 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 CYFIP2Q96F07 1278 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 GCNAQ96QF7 691 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 TWNKQ96RR1 684 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 HNRNPABQ99729 332 aaKnown RBP14.35□□□□□ -0.11
RPAIN-205ENST00000536255 B3GNT5Q9BYG0 378 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 ATXN3LQ9H3M9 355 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 TRPV4Q9HBA0 871 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 IL21Q9HBE4 155 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 EHD2Q9NZN4 543 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 WNT16Q9UBV4 365 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 KIAA1257Q9ULG3 409 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 DAAM1Q9Y4D1 1078 aa14.35□□□□□ -0.11
RPAIN-205ENST00000536255 NOL4O94818 638 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 SERPINC1P01008 464 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 KRT5P13647 590 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 SLC8A3P57103 927 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 SGO2Q562F6 1265 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 STXBP5Q5T5C0 1151 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 TANGO2Q6ICL3 276 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 FAM35AQ86V20 835 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 FUKQ8N0W3 1084 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 SIX5Q8N196 739 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 C12orf29Q8N999 325 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 SLC2A14Q8TDB8 520 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 KAT5Q92993 513 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 TRMT2BQ96GJ1 504 aaKnown RBP14.34□□□□□ -0.11
RPAIN-205ENST00000536255 SPATA17Q96L03 361 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 C8orf48Q96LL4 319 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 KREMEN1Q96MU8 473 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 ANP32EQ9BTT0 268 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 LSM14BQ9BX40 385 aaKnown RBP14.34□□□□□ -0.11
RPAIN-205ENST00000536255 PLA2G2FQ9BZM2 168 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 ZNF518BQ9C0D4 1074 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 MFSD1Q9H3U5 465 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 ZFP14Q9HCL3 533 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 DMAP1Q9NPF5 467 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-205ENST00000536255 PLCB1Q9NQ66 1216 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 KRT82Q9NSB4 513 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 FAM49BQ9NUQ9 324 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 UXTQ9UBK9 157 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-205ENST00000536255 MAGED2Q9UNF1 606 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-205ENST00000536255 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
RPAIN-205ENST00000536255 SLC38A8A6NNN8 435 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 F8VP50 259 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 CLDN5O00501 218 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 AP1G2O75843 785 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 FAM200BP0CF97 657 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 VDRP11473 427 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 CCDC130P13994 396 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 CD19P15391 556 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 ACO1P21399 889 aaKnown RBP14.33□□□□□ -0.12
RPAIN-205ENST00000536255 GPC5P78333 572 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 CYP4F8P98187 520 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 KCNMA1Q12791 1236 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 STILQ15468 1287 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 ARHGAP44Q17R89 818 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 GPR158Q5T848 1215 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 KLHDC7AQ5VTJ3 777 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 ARHGAP17Q68EM7 881 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 APTXQ7Z2E3 356 aaKnown RBP14.33□□□□□ -0.12
RPAIN-205ENST00000536255 TMEM150AQ86TG1 271 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 RBBP8NLQ8NC74 664 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-205ENST00000536255 MYRFLQ96LU7 910 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 PCMTD1Q96MG8 357 aaPredicted RBP14.33□□□□□ -0.12
RPAIN-205ENST00000536255 ERGIC2Q96RQ1 377 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 SIX2Q9NPC8 291 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 DNAJC12Q9UKB3 198 aa14.33□□□□□ -0.12
RPAIN-205ENST00000536255 F11P03951 625 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms