RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 EBF2Q9HAK2 575 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ATP6V0A4Q9HBG4 840 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 SLC38A10Q9HBR0 1119 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 NOD2Q9HC29 1040 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 KMT5AQ9NQR1 393 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ARHGEF3Q9NR81 526 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 TOPORSQ9NS56 1045 aaPredicted RBP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ABCF3Q9NUQ8 709 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 MARK1Q9P0L2 795 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 KLHL42Q9P2K6 505 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ARHGAP28Q9P2N2 729 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ASIC3Q9UHC3 531 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ANAPC5Q9UJX4 755 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 AGAP1Q9UPQ3 857 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 PTPN22Q9Y2R2 807 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 ARL2BPQ9Y2Y0 163 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS33A-203ENST00000536212 PCDHGB7Q9Y5F8 929 aa6.06□□□□□ -1.44
VPS33A-203ENST00000536212 LOC102724159A0A0B4J2E5 919 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 A0A1B0GUA9 196 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 TCRBV5S1A1TA0A578 114 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CLRN2A0PK11 232 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 TMEM150BA6NC51 233 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 DYRK3O43781 588 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 EXTL3O43909 919 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ZNF862O60290 1169 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 MMP20O60882 483 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ATP9AO75110 1047 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ATP2C2O75185 946 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CDH16O75309 829 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ACSL3O95573 720 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 DLATP10515 647 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 RALAP11233 206 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CETPP11597 493 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 BRAFP15056 766 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CREB1P16220 341 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 TAC1P20366 129 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 TARSP26639 723 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 PTPN7P35236 360 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 TAS2R40P59535 323 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 RPS6P62753 249 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 RACK1P63244 317 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 NOMO3P69849 1222 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CTBSQ01459 385 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 SPEM2Q0P670 501 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 STRN3Q13033 797 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 SNX1Q13596 522 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 PWP2Q15269 919 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ZYXQ15942 572 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CCDC38Q502W7 563 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 TMEM63BQ5T3F8 832 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 FAM102BQ5T8I3 360 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 LIN9Q5TKA1 542 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 LRRC38Q5VT99 294 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 PLA2G4FQ68DD2 849 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CGB2Q6NT52 195 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 PPP1R21Q6ZMI0 780 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ARHGEF18Q6ZSZ5 1173 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CHSY3Q70JA7 882 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ANO5Q75V66 913 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ASRGL1Q7L266 308 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 OTUD6AQ7L8S5 288 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 SPATA21Q7Z572 469 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ANKS1BQ7Z6G8 1248 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CCDC25Q86WR0 208 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 RHOT1Q8IXI2 618 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ABRAQ8N0Z2 381 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ZCCHC9Q8N567 271 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 UBR7Q8N806 425 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 MCPH1Q8NEM0 835 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 FEZF2Q8TBJ5 459 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 DENND1AQ8TEH3 1009 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ATG4AQ8WYN0 398 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 POMGNT1Q8WZA1 660 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CCDC127Q96BQ5 260 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 GPRASP2Q96D09 838 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 ABHD17AQ96GS6 310 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 SCLT1Q96NL6 688 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 CCDC77Q9BR77 488 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 MOV10L1Q9BXT6 1211 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 OSBPL8Q9BZF1 889 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 TRIM7Q9C029 511 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 VPS33BQ9H267 617 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 PPCSQ9HAB8 311 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 RXFP1Q9HBX9 757 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 RAVER2Q9HCJ3 691 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 UBN1Q9NPG3 1134 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 XPNPEP1Q9NQW7 623 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 PXMP2Q9NR77 195 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 C1orf112Q9NSG2 853 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 FGFR1OP2Q9NVK5 253 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 NAALADL1Q9UQQ1 740 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 DRG1Q9Y295 367 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 R3HDM2Q9Y2K5 976 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 PCDHA10Q9Y5I2 948 aa6.05□□□□□ -1.44
VPS33A-203ENST00000536212 MRPL42Q9Y6G3 142 aaKnown RBP6.05□□□□□ -1.44
VPS33A-203ENST00000536212 RGPD3A6NKT7 1758 aaPredicted RBP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 RGPD4Q7Z3J3 1758 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 FAM170AA1A519 330 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 DNALI1O14645 258 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms