RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 ERO1BQ86YB8 467 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 NAT8LQ8N9F0 302 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 UBA3Q8TBC4 463 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 DENND1AQ8TEH3 1009 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 FDXACB1Q9BRP7 624 aaPredicted RBP13.78□□□□□ -0.2
LDLR-203ENST00000535915 PPCSQ9HAB8 311 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 ERAP1Q9NZ08 941 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.78□□□□□ -0.2
LDLR-203ENST00000535915 CLUHO75153 1309 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 A0A1W2PPM1 405 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 APOC4-APOC2K7ER74 178 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 MCF2LO15068 1137 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 DDNO94850 711 aaPredicted RBP13.78□□□□□ -0.2
LDLR-203ENST00000535915 C22orf31O95567 290 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 APOC2P02655 101 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 TNFAIP2Q03169 654 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 SMYD5Q6GMV2 418 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 CEP57Q86XR8 500 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 FAM71DQ8N9W8 422 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 ATP11CQ8NB49 1132 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 CMASQ8NFW8 434 aaPredicted RBP13.78□□□□□ -0.2
LDLR-203ENST00000535915 MCRS1Q96EZ8 462 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 ASNSD1Q9NWL6 643 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 BAIAP2L1Q9UHR4 511 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 RABGEF1Q9UJ41 708 aa13.78□□□□□ -0.2
LDLR-203ENST00000535915 PIK3R2O00459 728 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 ATP6V1G2O95670 118 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 TRUB2O95900 331 aaKnown RBP13.77□□□□□ -0.2
LDLR-203ENST00000535915 P4HA1P13674 534 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 INSRRP14616 1297 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 GPD2P43304 727 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 BASP1P80723 227 aaKnown RBP13.77□□□□□ -0.2
LDLR-203ENST00000535915 MGAT5Q09328 741 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 EFTUD2Q15029 972 aaKnown RBP eCLIP13.77□□□□□ -0.21e-6■■■■□ 19.3
LDLR-203ENST00000535915 EFHC2Q5JST6 749 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 RNF43Q68DV7 783 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 C3orf62Q6ZUJ4 267 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 MOB2Q70IA6 237 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 FBXO36Q8NEA4 188 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 SPATA18Q8TC71 538 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 SPOCK2Q92563 424 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 THOC1Q96FV9 657 aaKnown RBP13.77□□□□□ -0.2
LDLR-203ENST00000535915 HPDLQ96IR7 371 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 FAXDC2Q96IV6 333 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 NFKBIZQ9BYH8 718 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 XPO7Q9UIA9 1087 aaKnown RBP13.77□□□□□ -0.2
LDLR-203ENST00000535915 PHTF1Q9UMS5 762 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 AKT3Q9Y243 479 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 SBF1O95248 1867 aa13.77□□□□□ -0.2
LDLR-203ENST00000535915 TCRBV7S3A2A0A539 114 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 PIAS1O75925 651 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 RBP3P10745 1247 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 MCF2P10911 925 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 KRT4P19013 534 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 ATICP31939 592 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 GABRB2P47870 512 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 SLC18A1P54219 525 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 KCNJ2P63252 427 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 TTLL12Q14166 644 aaPredicted RBP13.77□□□□□ -0.21
LDLR-203ENST00000535915 ECHDC2Q86YB7 292 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 PALM2Q8IXS6 379 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 KLHL29Q96CT2 875 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 MAK16Q9BXY0 300 aaKnown RBP13.77□□□□□ -0.21
LDLR-203ENST00000535915 PDZD7Q9H5P4 517 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 CYP3A43Q9HB55 503 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 GRID1Q9ULK0 1009 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 PLXNA1Q9UIW2 1896 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 CXCL11O14625 94 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 HMGCRP04035 888 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 VDRP11473 427 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 NQO1P15559 274 aaKnown RBP13.77□□□□□ -0.21
LDLR-203ENST00000535915 GBP2P32456 591 aaPredicted RBP13.77□□□□□ -0.21
LDLR-203ENST00000535915 MMRN1Q13201 1228 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 ACVR2BQ13705 512 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 ACAP1Q15027 740 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 RASA2Q15283 850 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 BBS9Q3SYG4 887 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 GJC2Q5T442 439 aaPredicted RBP13.77□□□□□ -0.21
LDLR-203ENST00000535915 HHATQ5VTY9 493 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 PDIK1LQ8N165 341 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 CXorf38Q8TB03 319 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 LRRC8CQ8TDW0 803 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 FBF1Q8TES7 1133 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 PHACTR1Q9C0D0 580 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 ASB7Q9H672 318 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 RSAD1Q9HA92 442 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 NOD2Q9HC29 1040 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 ADARB2Q9NS39 739 aaKnown RBP13.77□□□□□ -0.21
LDLR-203ENST00000535915 STARD13Q9Y3M8 1113 aa13.77□□□□□ -0.21
LDLR-203ENST00000535915 IGF2BP3O00425 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
LDLR-203ENST00000535915 MAGEB2O15479 319 aa13.76□□□□□ -0.21
LDLR-203ENST00000535915 TMEM63AO94886 807 aa13.76□□□□□ -0.21
LDLR-203ENST00000535915 VTNP04004 478 aa13.76□□□□□ -0.21
LDLR-203ENST00000535915 NRLP54845 237 aa13.76□□□□□ -0.21
LDLR-203ENST00000535915 CDH6P55285 790 aa13.76□□□□□ -0.21
LDLR-203ENST00000535915 TMEM132DQ14C87 1099 aa13.76□□□□□ -0.21
LDLR-203ENST00000535915 SLC1A5Q15758 541 aa13.76□□□□□ -0.21
LDLR-203ENST00000535915 PDK4Q16654 411 aa13.76□□□□□ -0.21
LDLR-203ENST00000535915 AMHR2Q16671 573 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms