RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 NFATC1O95644 943 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 PDIA4P13667 645 aaKnown RBP11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 HDCP19113 662 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 SYT1P21579 422 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 HOXC13P31276 330 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 HOXD12P35452 270 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 OPRD1P41143 372 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 TUBP50607 506 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 DGKEP52429 567 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 DMC1Q14565 340 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 ELF2Q15723 593 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 PEAR1Q5VY43 1037 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 PMS2CLQ68D20 193 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 IL31Q6EBC2 164 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 SPATA2LQ8IUW3 424 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 TTC8Q8TAM2 541 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 SAAL1Q96ER3 474 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 ANKRD36BP1Q96IX9 119 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 CYP2S1Q96SQ9 504 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 SYT15Q9BQS2 421 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 MTMR12Q9C0I1 747 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 PANK4Q9NVE7 773 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 COMMD8Q9NX08 183 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 MAGEC2Q9UBF1 373 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 EVLQ9UI08 416 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 MMP17Q9ULZ9 603 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 UBE4BO95155 1302 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 PTPRJQ12913 1337 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 PLXND1Q9Y4D7 1925 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 NUP205Q92621 2012 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 MYO18AQ92614 2054 aaKnown RBP11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 PI4KAP42356 2102 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 HELZP42694 1942 aaKnown RBP11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 C2orf78A6NCI8 922 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 UPK3BL1B0FP48 263 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 UPK3BL2E5RIL1 263 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 TGFB1I1O43294 461 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 PPP6R2O75170 966 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 KCNK5O95279 499 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 CKMP06732 381 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 TMEM191BP0C7N4 346 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 CCDC192P0DO97 292 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 CSRP1P21291 193 aaKnown RBP11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 LMO2P25791 158 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 ATICP31939 592 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 DPP6P42658 865 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 IFNAR2P48551 515 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 MCCD1P59942 119 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 PSMD6Q15008 389 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 CRY1Q16526 586 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 BMT2Q1RMZ1 405 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 N4BP2L1Q5TBK1 243 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 DDX42Q86XP3 938 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 CCDC65Q8IXS2 484 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 ARL14EPQ8N8R7 260 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 C12orf50Q8NA57 414 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 OR5B17Q8NGF7 314 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 SH3RF2Q8TEC5 729 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 PCED1BQ96HM7 432 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 CLIC6Q96NY7 704 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 FGFBP2Q9BYJ0 223 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 TRIM9Q9C026 710 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 GZF1Q9H116 711 aaPredicted RBP11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 XYLT2Q9H1B5 865 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 LINC00597Q9H2U6 94 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 MAGEF1Q9HAY2 307 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 RXFP3Q9NSD7 469 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 TRPM5Q9NZQ8 1165 aa11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 FASNP49327 2511 aaKnown RBP11.98□□□□□ -0.49
CLSTN3-206ENST00000535668 TNNC2P02585 160 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 ZDHHC11BP0C7U3 371 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 ACAT1P24752 427 aaKnown RBP11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 STAT6P42226 847 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 TNFRSF4P43489 277 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 KIR2DL1P43626 348 aaPredicted RBP11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 KCNB1Q14721 858 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 SF3A2Q15428 464 aaKnown RBP11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 ST3GAL2Q16842 350 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 AASDHQ4L235 1098 aaPredicted RBP11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 USP39Q53GS9 565 aaKnown RBP11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 SDHAF4Q5VUM1 108 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 TRAPPC11Q7Z392 1133 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 CBWD2Q8IUF1 395 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 SYCP3Q8IZU3 236 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 PHTF2Q8N3S3 785 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 LINC00301Q8NCQ3 95 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 RPLP0P6Q8NHW5 317 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 C7orf25Q9BPX7 421 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 ELOVL4Q9GZR5 314 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 HSPBP1Q9NZL4 362 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 TBC1D7Q9P0N9 293 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 TBC1D14Q9P2M4 693 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 MAGED2Q9UNF1 606 aaPredicted RBP11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 MTMR6Q9Y217 621 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 WNT6Q9Y6F9 365 aa11.97□□□□□ -0.49
CLSTN3-206ENST00000535668 E2F8A0AVK6 867 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 LNP1A1A4G5 178 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 LEFTY2O00292 366 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 TNFRSF10BO14763 440 aa11.96□□□□□ -0.49
CLSTN3-206ENST00000535668 KRT37O76014 449 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms