RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 ORC1Q13415 861 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 ZNF268Q14587 947 aaPredicted RBP22.66■■□□□ 1.22
PKP3-211ENST00000534401 PHLDB3Q6NSJ2 640 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 EHBP1Q8NDI1 1231 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 SLC2A14Q8TDB8 520 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 MRPS31Q92665 395 aaKnown RBP22.66■■□□□ 1.22
PKP3-211ENST00000534401 DDX23Q9BUQ8 820 aaKnown RBP22.66■■□□□ 1.22
PKP3-211ENST00000534401 THAP9Q9H5L6 903 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 SLITRK6Q9H5Y7 841 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 DMAP1Q9NPF5 467 aaPredicted RBP22.66■■□□□ 1.22
PKP3-211ENST00000534401 GCNT4Q9P109 453 aa22.66■■□□□ 1.22
PKP3-211ENST00000534401 ARIH1Q9Y4X5 557 aaPredicted RBP22.66■■□□□ 1.22
PKP3-211ENST00000534401 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.66■■□□□ 1.22
PKP3-211ENST00000534401 CLSTN1O94985 981 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 PRAMEF12O95522 483 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 CCDC130P13994 396 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 CD58P19256 250 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 TBXAS1P24557 533 aaPredicted RBP22.65■■□□□ 1.22
PKP3-211ENST00000534401 PPP3CCP48454 512 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 CLCN5P51795 746 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 STARD6P59095 220 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 IER5LQ5T953 404 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 TXNDC8Q6A555 127 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 NUP93Q8N1F7 819 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 DNASE1L2Q92874 299 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 CYFIP2Q96F07 1278 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 CNOT6LQ96LI5 555 aaKnown RBP22.65■■□□□ 1.22
PKP3-211ENST00000534401 TRMT61BQ9BVS5 477 aaKnown RBP22.65■■□□□ 1.22
PKP3-211ENST00000534401 DACH1Q9UI36 760 aa22.65■■□□□ 1.22
PKP3-211ENST00000534401 SHISA7A6NL88 538 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 HHLA1C9JL84 531 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 AP1G2O75843 785 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 BEST1O76090 585 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 RTN3O95197 1032 aaPredicted RBP22.64■■□□□ 1.21
PKP3-211ENST00000534401 ACO1P21399 889 aaKnown RBP22.64■■□□□ 1.21
PKP3-211ENST00000534401 SNX30Q5VWJ9 437 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 ARHGAP17Q68EM7 881 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 CWF19L1Q69YN2 538 aaKnown RBP22.64■■□□□ 1.21
PKP3-211ENST00000534401 SIX5Q8N196 739 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 MAB21L3Q8N8X9 362 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 OVCA2Q8WZ82 227 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 TMEM176AQ96HP8 235 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 PNPLA8Q9NP80 782 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 ARHGEF3Q9NR81 526 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 KRT82Q9NSB4 513 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 FAM49BQ9NUQ9 324 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 FBXL21Q9UKT6 434 aa22.64■■□□□ 1.21
PKP3-211ENST00000534401 ZNF840PA6NDX5 716 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 CHADO15335 359 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 TCF3P15923 654 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 TRIM21P19474 475 aaKnown RBP22.63■■□□□ 1.21
PKP3-211ENST00000534401 AVPR2P30518 371 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 MLLT6P55198 1093 aaPredicted RBP22.63■■□□□ 1.21
PKP3-211ENST00000534401 PRKCQQ04759 706 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 CETN1Q12798 172 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 SLC44A4Q53GD3 710 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 CLEC20AQ6ZU45 233 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 CELF5Q8N6W0 485 aaKnown RBP22.63■■□□□ 1.21
PKP3-211ENST00000534401 USP13Q92995 863 aaPredicted RBP22.63■■□□□ 1.21
PKP3-211ENST00000534401 NT5C1BQ96P26 610 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 MED10Q9BTT4 135 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 DNAI2Q9GZS0 605 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 KCNH6Q9H252 994 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 CACNA1HO95180 2353 aa22.63■■□□□ 1.21
PKP3-211ENST00000534401 OLFM2O95897 454 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 ZDHHC11BP0C7U3 371 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 PLA2G5P39877 138 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 NUBP1P53384 320 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 YWHAEP62258 255 aaKnown RBP22.62■■□□□ 1.21
PKP3-211ENST00000534401 GCNT1Q02742 428 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 GRM2Q14416 872 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 PPP1R26Q5T8A7 1209 aaPredicted RBP22.62■■□□□ 1.21
PKP3-211ENST00000534401 SMYD5Q6GMV2 418 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 ASTLQ6HA08 431 aaPredicted RBP22.62■■□□□ 1.21
PKP3-211ENST00000534401 IRF7Q92985 503 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 SLC22A12Q96S37 553 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 DUSP16Q9BY84 665 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 KIF9Q9HAQ2 790 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 TDP1Q9NUW8 608 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 TRPM5Q9NZQ8 1165 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 CNTN6Q9UQ52 1028 aa22.62■■□□□ 1.21
PKP3-211ENST00000534401 HELZP42694 1942 aaKnown RBP22.62■■□□□ 1.21
PKP3-211ENST00000534401 TICRRQ7Z2Z1 1910 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 GTPBP10A4D1E9 387 aaKnown RBP22.61■■□□□ 1.21
PKP3-211ENST00000534401 FAM200BP0CF97 657 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 AOC1P19801 751 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 YWHAQP27348 245 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 SLC5A3P53794 718 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 VCPP55072 806 aaKnown RBP22.61■■□□□ 1.21
PKP3-211ENST00000534401 TAF10Q12962 218 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 SUGP1Q8IWZ8 645 aaKnown RBP22.61■■□□□ 1.21
PKP3-211ENST00000534401 SCAMP5Q8TAC9 235 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 ENOX1Q8TC92 643 aaKnown RBP22.61■■□□□ 1.21
PKP3-211ENST00000534401 JAKMIP2Q96AA8 810 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 UBXN6Q9BZV1 441 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 BRD9Q9H8M2 597 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 KIAA1257Q9ULG3 409 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 CA14Q9ULX7 337 aa22.61■■□□□ 1.21
PKP3-211ENST00000534401 C2orf78A6NCI8 922 aa22.6■■□□□ 1.21
PKP3-211ENST00000534401 OAS1P00973 400 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms