RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	SLC11A2	P49281	568 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	WNT3	P56703	355 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	LILRA4	P59901	499 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	RPS16	P62249	146 aa	Known RBP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	SLC10A2	Q12908	348 aa	Predicted RBP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	EIF2B5	Q13144	721 aa	Known RBP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	SLC13A2	Q13183	592 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	SEMA5A	Q13591	1074 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	EZH2	Q15910	746 aa	Known RBP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	ZIK1	Q3SY52	487 aa	Predicted RBP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	SYCP2L	Q5T4T6	812 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	DCAF12L1	Q5VU92	463 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	FCRLB	Q6BAA4	426 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	CEP85	Q6P2H3	762 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	LAYN	Q6UX15	382 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	KCTD20	Q7Z5Y7	419 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	CCDC146	Q8IYE0	955 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	OR56A3	Q8NH54	315 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	RFK	Q969G6	155 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	NAA15	Q9BXJ9	866 aa	Known RBP	4.2	□□□□□ -1.74
RDX-215	ENST00000533961	ACTRT3	Q9BYD9	372 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	SMURF2	Q9HAU4	748 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	CPNE5	Q9HCH3	593 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	FLRT1	Q9NZU1	646 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	TPCN1	Q9ULQ1	816 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	SHOC2	Q9UQ13	582 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	MED16	Q9Y2X0	877 aa		4.2	□□□□□ -1.74
RDX-215	ENST00000533961	LINC00473	A8K010	186 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	GOLIM4	O00461	696 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	SLC16A3	O15427	465 aa	Known RBP	4.19	□□□□□ -1.74
RDX-215	ENST00000533961	JTB	O76095	146 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	VNN1	O95497	513 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	IGKV2-30	P06310	120 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	CHRM2	P08172	466 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	CELA2A	P08217	269 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	HMGB1	P09429	215 aa	Known RBP	4.19	□□□□□ -1.74
RDX-215	ENST00000533961	MYF5	P13349	255 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	LRPAP1	P30533	357 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	CCKBR	P32239	447 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	PRIM2	P49643	509 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	FMO1	Q01740	532 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	IQCB1	Q15051	598 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	LONRF3	Q496Y0	759 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	AARS2	Q5JTZ9	985 aa	Known RBP	4.19	□□□□□ -1.74
RDX-215	ENST00000533961	TMEM63B	Q5T3F8	832 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	RBM20	Q5T481	1227 aa	Known RBP	4.19	□□□□□ -1.74
RDX-215	ENST00000533961	TSTD2	Q5T7W7	516 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	RRAGB	Q5VZM2	374 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	DARS2	Q6PI48	645 aa	Known RBP	4.19	□□□□□ -1.74
RDX-215	ENST00000533961	TMEM108	Q6UXF1	575 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	SEMA6D	Q8NFY4	1073 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	FCRL4	Q96PJ5	515 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	PTDSS2	Q9BVG9	487 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	SARG	Q9BW04	601 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	ARNT2	Q9HBZ2	717 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	SLC52A1	Q9NWF4	448 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	PIH1D1	Q9NWS0	290 aa	Known RBP	4.19	□□□□□ -1.74
RDX-215	ENST00000533961	XPR1	Q9UBH6	696 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	HESX1	Q9UBX0	185 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	SNX13	Q9Y5W8	968 aa		4.19	□□□□□ -1.74
RDX-215	ENST00000533961	NCK2	O43639	380 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	NDUFB7	P17568	137 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	YY1	P25490	414 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	PXN	P49023	591 aa	Predicted RBP	4.18	□□□□□ -1.74
RDX-215	ENST00000533961	CCT8	P50990	548 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	ARFIP2	P53365	341 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	GPSM2	P81274	684 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	CNGA2	Q16280	664 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	LONRF1	Q17RB8	773 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	PTCHD3	Q3KNS1	767 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	RP9	Q8TA86	221 aa	Known RBP	4.18	□□□□□ -1.74
RDX-215	ENST00000533961	TMEM171	Q8WVE6	324 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	STK31	Q9BXU1	1019 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.18	□□□□□ -1.74
RDX-215	ENST00000533961	SERHL	Q9NQF3	203 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
RDX-215	ENST00000533961	ARHGEF3	Q9NR81	526 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	ASB6	Q9NWX5	421 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	COL20A1	Q9P218	1284 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	SERTAD3	Q9UJW9	196 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	OGDHL	Q9ULD0	1010 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	PADI4	Q9UM07	663 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	TMX2	Q9Y320	296 aa		4.18	□□□□□ -1.74
RDX-215	ENST00000533961	LINC01548	A6NM66	108 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	VWC2L	B2RUY7	222 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961		H7C4K7	107 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	KIF3B	O15066	747 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	PPM1D	O15297	605 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	MGEA5	O60502	916 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	TJP3	O95049	919 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	KRT18	P05783	430 aa	Known RBP	4.17	□□□□□ -1.74
RDX-215	ENST00000533961	DLD	P09622	509 aa	Known RBP	4.17	□□□□□ -1.74
RDX-215	ENST00000533961	FAM163B	P0C2L3	166 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	EN2	P19622	333 aa	Predicted RBP	4.17	□□□□□ -1.74
RDX-215	ENST00000533961	CERS1	P27544	350 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	PROK1	P58294	105 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	FAM193A	P78312	1265 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	E2F2	Q14209	437 aa		4.17	□□□□□ -1.74
RDX-215	ENST00000533961	TBCC	Q15814	346 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms