RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 E2F1Q01094 437 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 ZNF268Q14587 947 aaPredicted RBP3.75□□□□□ -1.81
BRCA2-205ENST00000533776 CYP1B1Q16678 543 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 LY6KQ17RY6 165 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 ZIK1Q3SY52 487 aaPredicted RBP3.75□□□□□ -1.81
BRCA2-205ENST00000533776 SHC4Q6S5L8 630 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 ZNF517Q6ZMY9 492 aaPredicted RBP3.75□□□□□ -1.81
BRCA2-205ENST00000533776 ZBTB46Q86UZ6 589 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 KRT73Q86Y46 540 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 NRACQ8N912 160 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 MTFMTQ96DP5 389 aaKnown RBP3.75□□□□□ -1.81
BRCA2-205ENST00000533776 CDK5RAP3Q96JB5 506 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 ZC3H10Q96K80 434 aaKnown RBP3.75□□□□□ -1.81
BRCA2-205ENST00000533776 CNNM1Q9NRU3 951 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 STAP2Q9UGK3 403 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 GABRQQ9UN88 632 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 SCAF8Q9UPN6 1271 aaKnown RBP3.75□□□□□ -1.81
BRCA2-205ENST00000533776 STXBP5LQ9Y2K9 1186 aa3.75□□□□□ -1.81
BRCA2-205ENST00000533776 MYO1CO00159 1063 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 SOCS2O14508 198 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 ADAM10O14672 748 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 DSCR3O14972 297 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 ALDH2P05091 517 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 PRKCBP05771 671 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 SNHG28P0DPA3 235 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 SLC11A2P49281 568 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 RNASE12Q5GAN4 147 aaKnown RBP3.74□□□□□ -1.81
BRCA2-205ENST00000533776 CAND1Q86VP6 1230 aaKnown RBP3.74□□□□□ -1.81
BRCA2-205ENST00000533776 GRAMD1CQ8IYS0 662 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 PLBD2Q8NHP8 589 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 TMEM171Q8WVE6 324 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 PRR25Q96S07 402 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 MMS19Q96T76 1030 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 CGRRF1Q99675 332 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 TMEM79Q9BSE2 394 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 EFHD1Q9BUP0 239 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 SNX14Q9Y5W7 946 aa3.74□□□□□ -1.81
BRCA2-205ENST00000533776 TMEM232C9JQI7 657 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 FCHO1O14526 889 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 FGBP02675 491 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 TKTP29401 623 aaKnown RBP3.73□□□□□ -1.81
BRCA2-205ENST00000533776 PRKAG1P54619 331 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 FAM187BQ17R55 369 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 MGAT5BQ3V5L5 792 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 RUSC1-AS1Q66K80 236 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 MTHFD1LQ6UB35 978 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 CRELD2Q6UXH1 353 aaPredicted RBP3.73□□□□□ -1.81
BRCA2-205ENST00000533776 MRPL10Q7Z7H8 261 aaKnown RBP3.73□□□□□ -1.81
BRCA2-205ENST00000533776 IZUMO1Q8IYV9 350 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 ABRAQ8N0Z2 381 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 SPATA3Q8NHX4 192 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 MAP3K14Q99558 947 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 P2RX7Q99572 595 aaKnown RBP3.73□□□□□ -1.81
BRCA2-205ENST00000533776 TRMT13Q9NUP7 481 aaKnown RBP3.73□□□□□ -1.81
BRCA2-205ENST00000533776 TFCP2L1Q9NZI6 479 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 MED16Q9Y2X0 877 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 CADPSQ9ULU8 1353 aa3.73□□□□□ -1.81
BRCA2-205ENST00000533776 TCRBV5S1A1TA0A578 114 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 MYMKA6NI61 221 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 INSIG1O15503 277 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 GCATO75600 419 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 CYP2C9P11712 490 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 KCNA3P22001 575 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 AKAP5P24588 427 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 CCKBRP32239 447 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 DGKEP52429 567 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 WNT3P56703 355 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 RAB1AP62820 205 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 PSG6Q00889 435 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 RAPGEF1Q13905 1077 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 MLC1Q15049 377 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 KLHL22Q53GT1 634 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 ZNF813Q6ZN06 617 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 IRF2BP2Q7Z5L9 587 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 SAMD14Q8IZD0 417 aaPredicted RBP3.72□□□□□ -1.81
BRCA2-205ENST00000533776 SLC15A4Q8N697 577 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 DNAJC5GQ8N7S2 189 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 C16orf52Q8NHV5 167 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 PIGOQ8TEQ8 1089 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 CUL5Q93034 780 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 HPS3Q969F9 1004 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 MRGPRX1Q96LB2 322 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 MESP1Q9BRJ9 268 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 EBF3Q9H4W6 596 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 ASIC5Q9NY37 505 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 ZNF580Q9UK33 172 aa3.72□□□□□ -1.81
BRCA2-205ENST00000533776 H3BNC9 293 aa3.71□□□□□ -1.82
BRCA2-205ENST00000533776 CES2O00748 559 aa3.71□□□□□ -1.82
BRCA2-205ENST00000533776 THP07101 528 aa3.71□□□□□ -1.82
BRCA2-205ENST00000533776 PF4V1P10720 104 aa3.71□□□□□ -1.82
BRCA2-205ENST00000533776 MYCLP12524 364 aaPredicted RBP3.71□□□□□ -1.82
BRCA2-205ENST00000533776 XRCC6P12956 609 aaKnown RBP eCLIP3.71□□□□□ -1.82
BRCA2-205ENST00000533776 VCAM1P19320 739 aa3.71□□□□□ -1.82
BRCA2-205ENST00000533776 HOXD9P28356 352 aaPredicted RBP3.71□□□□□ -1.82
BRCA2-205ENST00000533776 LINC00205P59089 165 aa3.71□□□□□ -1.82
BRCA2-205ENST00000533776 GHRHRQ02643 423 aa3.71□□□□□ -1.82
BRCA2-205ENST00000533776 ZNF267Q14586 743 aaPredicted RBP3.71□□□□□ -1.82
BRCA2-205ENST00000533776 RBMS2Q15434 407 aaKnown RBP3.71□□□□□ -1.82
BRCA2-205ENST00000533776 TRIM71Q2Q1W2 868 aaKnown RBP3.71□□□□□ -1.82
BRCA2-205ENST00000533776 BRDTQ58F21 947 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms