RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 NCANO14594 1321 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 F8W810 466 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 H3BNC9 293 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 PPEF2O14830 753 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 SETSIPP0DME0 302 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 UNGP13051 313 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 DESP17661 470 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 CHRNB2P17787 502 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 AARSP49588 968 aaKnown RBP eCLIP11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 NOMO3P69849 1222 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 MAPRE1Q15691 268 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 TIGD5Q53EQ6 642 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 FAM171A1Q5VUB5 890 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 NAA35Q5VZE5 725 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 KIAA1841Q6NSI8 718 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 NLRC5Q86WI3 1866 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 PHF13Q86YI8 300 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 THEM5Q8N1Q8 247 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 PDCL2Q8N4E4 241 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 ZNF653Q96CK0 615 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 SUSD3Q96L08 255 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 SENP8Q96LD8 212 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 SDCBP2Q9H190 292 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 CERS4Q9HA82 394 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 ALG13Q9NP73 1137 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 AVENQ9NQS1 362 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 ADAM22Q9P0K1 906 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 CTTNBP2NLQ9P2B4 639 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 WDR35Q9P2L0 1181 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 CHD9Q3L8U1 2897 aa11.56□□□□□ -0.56
CCDC90B-218ENST00000533761 M0QZQ0 153 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 SYN3O14994 580 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 SPTLC1O15269 473 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 BRD2P25440 801 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 CDH5P33151 784 aaPredicted RBP11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 BRCC3P46736 316 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 HADHBP55084 474 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 GPM6BQ13491 265 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 TCEAL1Q15170 157 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 USP41Q3LFD5 358 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 LCLAT1Q6UWP7 414 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 CD300LGQ6UXG3 332 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 LIMS2Q7Z4I7 341 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 ERICH1Q86X53 443 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 VPS52Q8N1B4 723 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 CRYBG2Q8N1P7 616 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 TMEM130Q8N3G9 435 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 BCL7CQ8WUZ0 217 aaPredicted RBP11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 CYFIP2Q96F07 1278 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 MRPL45Q9BRJ2 306 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 REPIN1Q9BWE0 567 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 GPR62Q9BZJ7 368 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 ELOVL4Q9GZR5 314 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 THAP2Q9H0W7 228 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 ACP6Q9NPH0 428 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 PARVAQ9NVD7 372 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 L1RE1Q9UN81 338 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 PCDHGC5Q9Y5F6 944 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 SCN1AP35498 2009 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 KIAA1671Q9BY89 1806 aa11.55□□□□□ -0.56
CCDC90B-218ENST00000533761 M0QYV0 167 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 O00370 1275 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 EFEMP2O95967 443 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 SOD2P04179 222 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 CYP11A1P05108 521 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 TYMPP19971 482 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 MMP8P22894 467 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 IGFBP6P24592 240 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 BCAT1P54687 386 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 TSPY1Q01534 308 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 HABP4Q5JVS0 413 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 ARHGAP17Q68EM7 881 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 SCARA3Q6AZY7 606 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 PDE12Q6L8Q7 609 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 SPRED2Q7Z698 418 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 CEP57Q86XR8 500 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 PASD1Q8IV76 773 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 RNF168Q8IYW5 571 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 MCOLN2Q8IZK6 566 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 SLC35F6Q8N357 371 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 B3GALNT2Q8NCR0 500 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 SLC35G2Q8TBE7 412 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 SPPL3Q8TCT6 385 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 WHAMMQ8TF30 809 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 PCDHB18PQ96TA0 734 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 TTPALQ9BTX7 342 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 PACSIN1Q9BY11 444 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 OXCT2Q9BYC2 517 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 CHST7Q9NS84 486 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 CNOT8Q9UFF9 292 aaKnown RBP11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 CDH9Q9ULB4 789 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 SSX2IPQ9Y2D8 614 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 MYO9BQ13459 2157 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 I3L4J1 428 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 SOX1O00570 391 aaPredicted RBP11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 GABRDO14764 452 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 BUB1O43683 1085 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 CYP1A2P05177 515 aa11.54□□□□□ -0.56
CCDC90B-218ENST00000533761 FGFR3P22607 806 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms