RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 TNMDQ9H2S6 317 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 FZD8Q9H461 694 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 GSX1Q9H4S2 264 aaPredicted RBP8.35□□□□□ -1.07
CASP4-212ENST00000533730 MINDY3Q9H8M7 445 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 SLC28A3Q9HAS3 691 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 PARVGQ9HBI0 331 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 SEL1LQ9UBV2 794 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 APOBEC2Q9Y235 224 aaKnown RBP8.35□□□□□ -1.07
CASP4-212ENST00000533730 TRAF6Q9Y4K3 522 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 TRIOBPQ9H2D6 2365 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 CNTNAP2Q9UHC6 1331 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 GRXCR1A8MXD5 290 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 K7ERI5 159 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 ACKR2O00590 384 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 N4BP3O15049 544 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 POLR2DO15514 142 aaKnown RBP8.34□□□□□ -1.07
CASP4-212ENST00000533730 MGEA5O60502 916 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 CSDE1O75534 798 aaKnown RBP8.34□□□□□ -1.07
CASP4-212ENST00000533730 DGKIO75912 1065 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 PRKCBP05771 671 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 H2AFB1P0C5Y9 115 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 H2AFB2P0C5Z0 115 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 PYGMP11217 842 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 ADH5P11766 374 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 FGFR4P22455 802 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 MAP4K2Q12851 820 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 PRPF4BQ13523 1007 aaKnown RBP8.34□□□□□ -1.07
CASP4-212ENST00000533730 AUHQ13825 339 aaKnown RBP8.34□□□□□ -1.07
CASP4-212ENST00000533730 GIT2Q14161 759 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 BRD3Q15059 726 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 ECHDC2Q86YB7 292 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 CMTR2Q8IYT2 770 aaKnown RBP8.34□□□□□ -1.07
CASP4-212ENST00000533730 CEP57L1Q8IYX8 460 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 ABI1Q8IZP0 508 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 MYCT1Q8N699 235 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 C12orf50Q8NA57 414 aaPredicted RBP8.34□□□□□ -1.07
CASP4-212ENST00000533730 TMEM145Q8NBT3 493 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 C2CD4AQ8NCU7 369 aaPredicted RBP8.34□□□□□ -1.07
CASP4-212ENST00000533730 LRRC15Q8TF66 581 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 JPH3Q8WXH2 748 aaPredicted RBP8.34□□□□□ -1.07
CASP4-212ENST00000533730 KCNN1Q92952 543 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 MYRFLQ96LU7 910 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 SAMD11Q96NU1 681 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 ADPGKQ9BRR6 497 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 PANK2Q9BZ23 570 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 FAM105AQ9NUU6 356 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 ARHGAP28Q9P2N2 729 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 KCNH3Q9ULD8 1083 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 AP4E1Q9UPM8 1137 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 RWDD3Q9Y3V2 267 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 TTC3P53804 2025 aa8.34□□□□□ -1.07
CASP4-212ENST00000533730 ADGRA3Q8IWK6 1321 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 FAM237AA0A1B0GTK4 181 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 A0A1B0GUA9 196 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 ZNF891A8MT65 544 aaPredicted RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 ABLIM3O94929 683 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 FBXO21O94952 628 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 CRTAMO95727 393 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 CA3P07451 260 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 SNRPB2P08579 225 aaKnown RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 FURINP09958 794 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 PFKFB1P16118 471 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 ARF4P18085 180 aaPredicted RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 HOXA11P31270 313 aaPredicted RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 SYKP43405 635 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 RABGGTBP53611 331 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 NCKAP1LP55160 1127 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 ALCAMQ13740 583 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 ZCCHC8Q6NZY4 707 aaKnown RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 SLC27A1Q6PCB7 646 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 MAMDC2Q7Z304 686 aaPredicted RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 CCDC65Q8IXS2 484 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 FIBCD1Q8N539 461 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 MRPS27Q92552 414 aaKnown RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 DHX58Q96C10 678 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 ZNF689Q96CS4 500 aaPredicted RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 HVCN1Q96D96 273 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 MRPL9Q9BYD2 267 aaKnown RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 TRIM6Q9C030 488 aaPredicted RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 TMEM117Q9H0C3 514 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 NKX2-4Q9H2Z4 354 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 ST6GALNAC4Q9H4F1 302 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 ZHX3Q9H4I2 956 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 UBN1Q9NPG3 1134 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 YBX2Q9Y2T7 364 aaKnown RBP8.33□□□□□ -1.08
CASP4-212ENST00000533730 PCDHB2Q9Y5E7 798 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 ZMYM2Q9UBW7 1377 aa8.33□□□□□ -1.08
CASP4-212ENST00000533730 NPHP3-ACAD11A0A0J9YXS1 232 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 GOLGA6CA6NDK9 693 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 GOLGA6BA6NDN3 693 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 MYMKA6NI61 221 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 K7ENM7 598 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 SLC16A4O15374 487 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 PRKD3O94806 890 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 GOLGA6DP0CG33 693 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 IDEP14735 1019 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 SCNN1BP51168 640 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 ZNF445P59923 1031 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 TAP1Q03518 808 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 BTG3Q14201 252 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms