RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 BIRC3Q13489 604 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 KMT5BQ4FZB7 885 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 TMEM196Q5HYL7 178 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 Q6ZS52 159 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 LONP2Q86WA8 852 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 CPA6Q8N4T0 437 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 TTC16Q8NEE8 873 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 PARD3BQ8TEW8 1205 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 OSCP1Q8WVF1 389 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 ATP2A3Q93084 1043 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 CCDC47Q96A33 483 aaKnown RBP13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 C8orf48Q96LL4 319 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 ELOVL4Q9GZR5 314 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 XYLT2Q9H1B5 865 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 ECT2Q9H8V3 914 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 VRTNQ9H8Y1 702 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 DMAC2Q9NW81 257 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 GCNT4Q9P109 453 aa13.23□□□□□ -0.29
CAPRIN1-213ENST00000533562 C2orf78A6NCI8 922 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 CHURC1-FNTBB4DL54 471 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 F8VP50 259 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 P4HA1P13674 534 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 ARSAP15289 507 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 TCF3P15923 654 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 SYKP43405 635 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 IFNAR2P48551 515 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 FNTBP49356 437 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 CASP4P49662 377 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 GALK1P51570 392 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 NCOA4Q13772 614 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 SIM2Q14190 667 aaPredicted RBP13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 PUM1Q14671 1186 aaKnown RBP eCLIP13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 ZNF77Q15935 545 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 ZNF699Q32M78 642 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 ZNF667Q5HYK9 610 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 WDR44Q5JSH3 913 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 TDRD10Q5VZ19 366 aaKnown RBP13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 LAIR1Q6GTX8 287 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 PRR23BQ6ZRT6 265 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 B3GALNT2Q8NCR0 500 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 KIAA0895Q8NCT3 520 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 SH3RF2Q8TEC5 729 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 RMDN1Q96DB5 314 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 TNIP3Q96KP6 325 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 SLITRK1Q96PX8 696 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 SLC22A12Q96S37 553 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 P2RY13Q9BPV8 354 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 TTLL2Q9BWV7 592 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 SCAND2PQ9GZW5 306 aaPredicted RBP13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 GZF1Q9H116 711 aaPredicted RBP13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 ARHGAP26Q9UNA1 814 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 HPSEQ9Y251 543 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 FRMD4BQ9Y2L6 1034 aa13.22□□□□□ -0.29
CAPRIN1-213ENST00000533562 SDK1Q7Z5N4 2213 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 ZNF840PA6NDX5 716 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 LRRIQ3A6PVS8 624 aaPredicted RBP13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 PRR5-ARHGAP8B1AHC4 643 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 K7ESF4 209 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 IKBKBO14920 756 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 HRO43593 1189 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 CALUO43852 315 aaPredicted RBP13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 ABL1P00519 1130 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 C4BPAP04003 597 aaKnown RBP13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 RPN1P04843 607 aaKnown RBP13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 RETP07949 1114 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 GJA4P35212 333 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 USP46P62068 366 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 ARHGAP8P85298 464 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 SGSM1Q2NKQ1 1148 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 FBXO43Q4G163 708 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 HEATR6Q6AI08 1181 aaKnown RBP13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 FSTL4Q6MZW2 842 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 NUP93Q8N1F7 819 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 KIAA1958Q8N8K9 716 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 CCDC26Q8TAB7 109 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 RIN3Q8TB24 985 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 KCTD10Q9H3F6 313 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 DPEP3Q9H4B8 488 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 SLC8A2Q9UPR5 921 aa13.21□□□□□ -0.29
CAPRIN1-213ENST00000533562 ATP8B3O60423 1300 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 SPTBN2O15020 2390 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 RTN3O95197 1032 aaPredicted RBP13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 NFATC1O95644 943 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 NR3C1P04150 777 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 TRIM21P19474 475 aaKnown RBP13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 YWHAQP27348 245 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 CDH8P55286 799 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 SLC7A9P82251 487 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 LMNB2Q03252 620 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 TAF10Q12962 218 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 USP4Q13107 963 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 LPAL2Q16609 132 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 EML3Q32P44 896 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 CEP135Q66GS9 1140 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 DGLUCYQ7Z3D6 616 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 PLEKHO2Q8TD55 490 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 TMC2Q8TDI7 906 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 TAF4BQ92750 862 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 CCDC34Q96HJ3 373 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms