RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 TRIM21P19474 475 aaKnown RBP23.69■■□□□ 1.38
BEST1-207ENST00000533521 KRT39Q6A163 491 aa23.69■■□□□ 1.38
BEST1-207ENST00000533521 SMYD4Q8IYR2 804 aaPredicted RBP23.69■■□□□ 1.38
BEST1-207ENST00000533521 ADSSL1Q8N142 457 aa23.69■■□□□ 1.38
BEST1-207ENST00000533521 TSG101Q99816 390 aa23.69■■□□□ 1.38
BEST1-207ENST00000533521 SDCBP2Q9H190 292 aa23.69■■□□□ 1.38
BEST1-207ENST00000533521 COMMD8Q9NX08 183 aa23.69■■□□□ 1.38
BEST1-207ENST00000533521 TRPM5Q9NZQ8 1165 aa23.69■■□□□ 1.38
BEST1-207ENST00000533521 SLC16A3O15427 465 aaKnown RBP23.68■■□□□ 1.38
BEST1-207ENST00000533521 LAMTOR5O43504 91 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 KINO60870 393 aaKnown RBP23.68■■□□□ 1.38
BEST1-207ENST00000533521 RTN3O95197 1032 aaPredicted RBP23.68■■□□□ 1.38
BEST1-207ENST00000533521 CTHP32929 405 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 ASPAP45381 313 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 GCLMP48507 274 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 KPNA1P52294 538 aaPredicted RBP23.68■■□□□ 1.38
BEST1-207ENST00000533521 PDGFRLQ15198 375 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 ITPRIPL2Q3MIP1 535 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 ZC3H14Q6PJT7 736 aaKnown RBP23.68■■□□□ 1.38
BEST1-207ENST00000533521 MAML2Q8IZL2 1156 aaPredicted RBP23.68■■□□□ 1.38
BEST1-207ENST00000533521 TTC39CQ8N584 583 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 CCDC150Q8NCX0 1101 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 STKLD1Q8NE28 680 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 OVCA2Q8WZ82 227 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 ZNF518BQ9C0D4 1074 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 DNAI2Q9GZS0 605 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 GKN1Q9NS71 199 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 SPATA6Q9NWH7 488 aaPredicted RBP23.68■■□□□ 1.38
BEST1-207ENST00000533521 IL37Q9NZH6 218 aa23.68■■□□□ 1.38
BEST1-207ENST00000533521 HELZP42694 1942 aaKnown RBP23.68■■□□□ 1.38
BEST1-207ENST00000533521 SPECC1L-ADORA2AF8WAN1 911 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 SP9P0CG40 484 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 TRIM49P0CI25 452 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 TRIM49CP0CI26 452 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 CHRNB1P11230 501 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 CCNE1P24864 410 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 STIM1Q13586 685 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 PAQR9Q6ZVX9 377 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 FAM35AQ86V20 835 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 GPIHBP1Q8IV16 184 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 NUP93Q8N1F7 819 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 PDZD8Q8NEN9 1154 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 TAS1R2Q8TE23 839 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 SMARCD1Q96GM5 515 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 DHTKD1Q96HY7 919 aaPredicted RBP23.67■■□□□ 1.38
BEST1-207ENST00000533521 SLITRK1Q96PX8 696 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 NIF3L1Q9GZT8 377 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 CSNK1G1Q9HCP0 422 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 TMEM30AQ9NV96 361 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 ARHGAP26Q9UNA1 814 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 CCL26Q9Y258 94 aa23.67■■□□□ 1.38
BEST1-207ENST00000533521 ZNF840PA6NDX5 716 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 OLFM2O95897 454 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 CKMP06732 381 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 HDCP19113 662 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 RAP1GAPP47736 663 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 NDST1P52848 882 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 USP46P62068 366 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 AMPD2Q01433 879 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 USP4Q13107 963 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 LRRC32Q14392 662 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 DGKKQ5KSL6 1271 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 CC2D1AQ6P1N0 951 aaPredicted RBP23.66■■□□□ 1.38
BEST1-207ENST00000533521 FUKQ8N0W3 1084 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 SYNPOQ8N3V7 929 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 NELL1Q92832 810 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 NKD2Q969F2 451 aaPredicted RBP23.66■■□□□ 1.38
BEST1-207ENST00000533521 ZFYVE19Q96K21 471 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 FAM126AQ9BYI3 521 aaPredicted RBP23.66■■□□□ 1.38
BEST1-207ENST00000533521 SMG9Q9H0W8 520 aaKnown RBP23.66■■□□□ 1.38
BEST1-207ENST00000533521 DMAP1Q9NPF5 467 aaPredicted RBP23.66■■□□□ 1.38
BEST1-207ENST00000533521 PRMT8Q9NR22 394 aaPredicted RBP23.66■■□□□ 1.38
BEST1-207ENST00000533521 GTSE1Q9NYZ3 720 aa23.66■■□□□ 1.38
BEST1-207ENST00000533521 RIF1Q5UIP0 2472 aaKnown RBP23.65■■□□□ 1.38
BEST1-207ENST00000533521 FAM92AA1XBS5 289 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 CLDN5O00501 218 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 PSMA7O14818 248 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 GFRA3O60609 400 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 CACNA2D1P54289 1103 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 RUNX3Q13761 415 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 ZNF77Q15935 545 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 SNX30Q5VWJ9 437 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 ANKRD40Q6AI12 368 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 SCARA5Q6ZMJ2 495 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 FRMD5Q7Z6J6 570 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 ACOT1Q86TX2 421 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 FBXL13Q8NEE6 735 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 LMAN1LQ9HAT1 526 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 NDRG2Q9UN36 371 aaKnown RBP23.65■■□□□ 1.38
BEST1-207ENST00000533521 COQ4Q9Y3A0 265 aa23.65■■□□□ 1.38
BEST1-207ENST00000533521 VPS13AQ96RL7 3174 aa23.64■■□□□ 1.38
BEST1-207ENST00000533521 PRR23AA6NEV1 266 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 TNFRSF10BO14763 440 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 CLSTN1O94985 981 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 YWHAQP27348 245 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 MXI1P50539 228 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 SLC7A9P82251 487 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 MTF1Q14872 753 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 SPOPLQ6IQ16 392 aa23.64■■□□□ 1.37
BEST1-207ENST00000533521 ARL14EPQ8N8R7 260 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms