RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 RPL10AP62906 217 aaKnown RBP8.39□□□□□ -1.07
NXF1-215ENST00000533440 TSPY1Q01534 308 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 ZNF33AQ06730 810 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 RAD51AP2Q09MP3 1159 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 TMEM132DQ14C87 1099 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 EOGTQ5NDL2 527 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 EMC10Q5UCC4 262 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 KRT79Q5XKE5 535 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 SLC36A4Q6YBV0 504 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 GLRX5Q86SX6 157 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 ADGRG2Q8IZP9 1017 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 PNPLA1Q8N8W4 532 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 TTC16Q8NEE8 873 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 SPATA18Q8TC71 538 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 HMGB4Q8WW32 186 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 BICD1Q96G01 975 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 LRIG1Q96JA1 1093 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 PNKPQ96T60 521 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 PKMYT1Q99640 499 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 ACBD6Q9BR61 282 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 RAB34Q9BZG1 259 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 FOXP1Q9H334 677 aaPredicted RBP8.39□□□□□ -1.07
NXF1-215ENST00000533440 ASB7Q9H672 318 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 BCCIPQ9P287 314 aaKnown RBP eCLIP8.39□□□□□ -1.07
NXF1-215ENST00000533440 HELZP42694 1942 aaKnown RBP8.39□□□□□ -1.07
NXF1-215ENST00000533440 CEP192Q8TEP8 1941 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 TCRBV21S2A2A0A5A6 115 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 MYMKA6NI61 221 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 KPNA7A9QM74 516 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 LEFTY2O00292 366 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 HNRNPDLO14979 420 aaKnown RBP8.38□□□□□ -1.07
NXF1-215ENST00000533440 CBFA2T3O75081 653 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 KAT7O95251 611 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 PFKLP17858 780 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 HDCP19113 662 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 SCP2P22307 547 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 TNFRSF4P43489 277 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 SLC6A11P48066 632 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 SLC12A3P55017 1021 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 GUCY1B3Q02153 619 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 RPL6Q02878 288 aaKnown RBP8.38□□□□□ -1.07
NXF1-215ENST00000533440 KCNB1Q14721 858 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 DHCR24Q15392 516 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 IL17AQ16552 155 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 SV2CQ496J9 727 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 CFAP221Q4G0U5 840 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 HYIQ5T013 277 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 SLC39A4Q6P5W5 647 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 TOGARAM2Q6ZUX3 1019 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 SLC41A1Q8IVJ1 513 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 NAXDQ8IW45 347 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 KCTD17Q8N5Z5 321 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 SYT2Q8N9I0 419 aaPredicted RBP8.38□□□□□ -1.07
NXF1-215ENST00000533440 FSIP1Q8NA03 581 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 MSTO1Q9BUK6 570 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 DPP3Q9NY33 737 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 KCND2Q9NZV8 630 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 KIAA1522Q9P206 1035 aaPredicted RBP8.38□□□□□ -1.07
NXF1-215ENST00000533440 LARSQ9P2J5 1176 aaKnown RBP8.38□□□□□ -1.07
NXF1-215ENST00000533440 APOBEC2Q9Y235 224 aaKnown RBP8.38□□□□□ -1.07
NXF1-215ENST00000533440 PCDHB9Q9Y5E1 797 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 TCHHQ07283 1943 aa8.38□□□□□ -1.07
NXF1-215ENST00000533440 MYO18AQ92614 2054 aaKnown RBP8.38□□□□□ -1.07
NXF1-215ENST00000533440 PTPRBP23467 1997 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 A0A087WV48 116 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 IGHV1OR15-9A0A0B4J2B8 117 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 DKK1O94907 266 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 APODP05090 189 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 GABRG2P18507 467 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 GRIA2P42262 883 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 PDE6CP51160 858 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 SLC7A9P82251 487 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 POU5F1Q01860 360 aaKnown RBP8.37□□□□□ -1.07
NXF1-215ENST00000533440 ST3GAL1Q11201 340 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 ARSHQ5FYA8 562 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 INTS6LQ5JSJ4 861 aaKnown RBP8.37□□□□□ -1.07
NXF1-215ENST00000533440 RHBDF2Q6PJF5 856 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 TMPRSS7Q7RTY8 843 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 FILIP1Q7Z7B0 1213 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 SLCO6A1Q86UG4 719 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 C12orf40Q86WS4 652 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 SCUBE3Q8IX30 993 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 PGBD3Q8N328 593 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 PHTF2Q8N3S3 785 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 PDCL2Q8N4E4 241 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 DEFB119Q8N690 84 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 FUBP3Q96I24 572 aaKnown RBP eCLIP8.37□□□□□ -1.07
NXF1-215ENST00000533440 PNMA5Q96PV4 448 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 ZDHHC4Q9NPG8 344 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 CALCOCO1Q9P1Z2 691 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 L1RE1Q9UN81 338 aa8.37□□□□□ -1.07
NXF1-215ENST00000533440 NPHP3-ACAD11A0A0J9YXS1 232 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.36□□□□□ -1.07
NXF1-215ENST00000533440 TK2O00142 265 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 LAD1O00515 517 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 SLC9A3R1O14745 358 aaPredicted RBP8.36□□□□□ -1.07
NXF1-215ENST00000533440 OLFM2O95897 454 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 PLA2G4BP0C869 781 aa8.36□□□□□ -1.07
NXF1-215ENST00000533440 ACAT1P24752 427 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms