RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 TTLL2Q9BWV7 592 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 KCTD10Q9H3F6 313 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 EBF3Q9H4W6 596 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 VRTNQ9H8Y1 702 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 EXOC1Q9NV70 894 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 GCNT4Q9P109 453 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 USP25Q9UHP3 1055 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 SMG5Q9UPR3 1016 aaKnown RBP12.07□□□□□ -0.48
CLCF1-202ENST00000533438 C2orf78A6NCI8 922 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 LRRIQ3A6PVS8 624 aaPredicted RBP12.06□□□□□ -0.48
CLCF1-202ENST00000533438 TRDMT1O14717 391 aaKnown RBP12.06□□□□□ -0.48
CLCF1-202ENST00000533438 TRIM66O15016 1216 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 C4BPAP04003 597 aaKnown RBP12.06□□□□□ -0.48
CLCF1-202ENST00000533438 MYL1P05976 194 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 USP17L7P0C7H9 530 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 ARSAP15289 507 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 TCF3P15923 654 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 PTPN1P18031 435 aaKnown RBP12.06□□□□□ -0.48
CLCF1-202ENST00000533438 GRIK1P39086 918 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 USP46P62068 366 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 TNNC1P63316 161 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 NOP14P78316 857 aaKnown RBP12.06□□□□□ -0.48
CLCF1-202ENST00000533438 CYP27A1Q02318 531 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 TRPC3Q13507 836 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 MTF1Q14872 753 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 TMEM196Q5HYL7 178 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 MDH1BQ5I0G3 518 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 TDRD10Q5VZ19 366 aaKnown RBP12.06□□□□□ -0.48
CLCF1-202ENST00000533438 DENND5BQ6ZUT9 1274 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 OR6B3Q8NGW1 331 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 GPT2Q8TD30 523 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 SYAP1Q96A49 352 aaPredicted RBP12.06□□□□□ -0.48
CLCF1-202ENST00000533438 HINFPQ9BQA5 517 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 SNX25Q9H3E2 840 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 GOLPH3LQ9H4A5 285 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 DPEP3Q9H4B8 488 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 TRPC7Q9HCX4 862 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 TMEM30AQ9NV96 361 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 C2orf42Q9NWW7 574 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 EML5Q05BV3 1969 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 ATG2BQ96BY7 2078 aa12.06□□□□□ -0.48
CLCF1-202ENST00000533438 TRAV19A0A0A6YYK7 116 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 F8VP50 259 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 PDXKO00764 312 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 VNN1O95497 513 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 PFKLP17858 780 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 AP3M2P53677 418 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 CACNA2D1P54289 1103 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 DMWDQ09019 674 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 PDGFRLQ15198 375 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 KLHL40Q2TBA0 621 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 SKOR2Q2VWA4 1001 aaPredicted RBP12.05□□□□□ -0.48
CLCF1-202ENST00000533438 FSTL4Q6MZW2 842 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 CC2D1AQ6P1N0 951 aaPredicted RBP12.05□□□□□ -0.48
CLCF1-202ENST00000533438 ARL14EPQ8N8R7 260 aaPredicted RBP12.05□□□□□ -0.48
CLCF1-202ENST00000533438 B3GALNT2Q8NCR0 500 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 ENGASEQ8NFI3 743 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 OSCP1Q8WVF1 389 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 C8orf48Q96LL4 319 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 CNTNAP3BQ96NU0 1288 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 RTKNQ9BST9 563 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 CNTNAP3Q9BZ76 1288 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 NCDNQ9UBB6 729 aa12.05□□□□□ -0.48
CLCF1-202ENST00000533438 NXF1Q9UBU9 619 aaKnown RBP12.05□□□□□ -0.48
CLCF1-202ENST00000533438 A8MXQ7 604 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 RHOBTB3O94955 611 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 RPN1P04843 607 aaKnown RBP12.04□□□□□ -0.48
CLCF1-202ENST00000533438 CKMP06732 381 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 ANXA13P27216 316 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 HOXA6P31267 233 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 GJA4P35212 333 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 SYKP43405 635 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 NDUFA8P51970 172 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 DLG4P78352 724 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 ZXDBP98169 803 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 LMNB2Q03252 620 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 KCNB1Q14721 858 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 ZNF699Q32M78 642 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 EML3Q32P44 896 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 PKN3Q6P5Z2 889 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 FMR1NBQ8N0W7 255 aaPredicted RBP12.04□□□□□ -0.48
CLCF1-202ENST00000533438 B3GNT5Q9BYG0 378 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 ZNF518BQ9C0D4 1074 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 ELOVL4Q9GZR5 314 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 SMYD3Q9H7B4 428 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 ECT2Q9H8V3 914 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 EHD2Q9NZN4 543 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 TRPM5Q9NZQ8 1165 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 ARHGAP26Q9UNA1 814 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 TRAF3IP3Q9Y228 551 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 MYH10P35580 1976 aa12.04□□□□□ -0.48
CLCF1-202ENST00000533438 ZNF840PA6NDX5 716 aa12.03□□□□□ -0.48
CLCF1-202ENST00000533438 CHURC1-FNTBB4DL54 471 aa12.03□□□□□ -0.48
CLCF1-202ENST00000533438 CLDN5O00501 218 aa12.03□□□□□ -0.48
CLCF1-202ENST00000533438 HRO43593 1189 aa12.03□□□□□ -0.48
CLCF1-202ENST00000533438 LRP3O75074 770 aa12.03□□□□□ -0.48
CLCF1-202ENST00000533438 PHACTR2O75167 634 aa12.03□□□□□ -0.48
CLCF1-202ENST00000533438 OLFM2O95897 454 aa12.03□□□□□ -0.48
CLCF1-202ENST00000533438 EGFP01133 1207 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms