RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 HEPACAM2A8MVW5 462 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 F8VP50 259 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 LRRN2O75325 713 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 RTN3O95197 1032 aaPredicted RBP10.45□□□□□ -0.74
NUP98-220ENST00000533346 PDGFBP01127 241 aaPredicted RBP10.45□□□□□ -0.74
NUP98-220ENST00000533346 CFHP08603 1231 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 ZDHHC11BP0C7U3 371 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 CCDC192P0DO97 292 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 ANXA13P27216 316 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 MAGEA9P43362 315 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 RAP1GAPP47736 663 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 PLCB2Q00722 1185 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 MLF2Q15773 248 aaPredicted RBP10.45□□□□□ -0.74
NUP98-220ENST00000533346 CAMK4Q16566 473 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 ARHGAP29Q52LW3 1261 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 WDR44Q5JSH3 913 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 STXBP5Q5T5C0 1151 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 ARHGAP17Q68EM7 881 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 MAMSTRQ6ZN01 415 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 FAM35AQ86V20 835 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 SCN4BQ8IWT1 228 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 PDZD8Q8NEN9 1154 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 ZMIZ2Q8NF64 920 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 BPIFB1Q8TDL5 484 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 JAKMIP2Q96AA8 810 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 RSPRY1Q96DX4 576 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 KXD1Q9BQD3 176 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 SRRTQ9BXP5 876 aaKnown RBP10.45□□□□□ -0.74
NUP98-220ENST00000533346 ZNF518BQ9C0D4 1074 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 IRF2BPLQ9H1B7 796 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 NUP62CLQ9H1M0 184 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 TMEM30AQ9NV96 361 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 DLGAP2Q9P1A6 1054 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 FBXL21Q9UKT6 434 aa10.45□□□□□ -0.74
NUP98-220ENST00000533346 KANSL1LA0AUZ9 987 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 ZNF840PA6NDX5 716 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 BIN1O00499 593 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 MAN2B1O00754 1011 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 ZNF263O14978 683 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 TBXAS1P24557 533 aaPredicted RBP10.44□□□□□ -0.74
NUP98-220ENST00000533346 VIPR2P41587 438 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 TUBP50607 506 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 CACNA2D1P54289 1103 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 VCPP55072 806 aaKnown RBP10.44□□□□□ -0.74
NUP98-220ENST00000533346 USP46P62068 366 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 SLC7A9P82251 487 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 CYP4F8P98187 520 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 CETN1Q12798 172 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 KCNH2Q12809 1159 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 CUL2Q13617 745 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 DCAF17Q5H9S7 520 aaPredicted RBP10.44□□□□□ -0.74
NUP98-220ENST00000533346 SDHAF4Q5VUM1 108 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 TCERG1LQ5VWI1 586 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 KLHL10Q6JEL2 608 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 ACOT1Q86TX2 421 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 SIX5Q8N196 739 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 ZNF687Q8N1G0 1237 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 TMEM105Q8N8V8 129 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 TATDN2Q93075 761 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 CLDN23Q96B33 292 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 CYFIP2Q96F07 1278 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 TMEM176AQ96HP8 235 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 LRRC3BQ96PB8 259 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 TWNKQ96RR1 684 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 KCNK16Q96T55 309 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 FAM83CQ9BQN1 747 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 DMAP1Q9NPF5 467 aaPredicted RBP10.44□□□□□ -0.74
NUP98-220ENST00000533346 CISHQ9NSE2 258 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 TDP1Q9NUW8 608 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 HMGXB4Q9UGU5 601 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 DACH1Q9UI36 760 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 KIAA1257Q9ULG3 409 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 CNTN6Q9UQ52 1028 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 CTNND2Q9UQB3 1225 aa10.44□□□□□ -0.74
NUP98-220ENST00000533346 GTPBP10A4D1E9 387 aaKnown RBP10.43□□□□□ -0.74
NUP98-220ENST00000533346 HHLA1C9JL84 531 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 GOLGA6L22H0YM25 854 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 CLDN5O00501 218 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 GALR2O43603 387 aaPredicted RBP10.43□□□□□ -0.74
NUP98-220ENST00000533346 OAS1P00973 400 aaKnown RBP10.43□□□□□ -0.74
NUP98-220ENST00000533346 USP17L7P0C7H9 530 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 YWHAQP27348 245 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 AVPR1AP37288 418 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 RPS9P46781 194 aaKnown RBP10.43□□□□□ -0.74
NUP98-220ENST00000533346 RAD23BP54727 409 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 YWHAEP62258 255 aaKnown RBP10.43□□□□□ -0.74
NUP98-220ENST00000533346 GCNT1Q02742 428 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 FZD5Q13467 585 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 CCDC40Q4G0X9 1142 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 TXNDC8Q6A555 127 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 SCARA5Q6ZMJ2 495 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 CLEC20AQ6ZU45 233 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 IRF2BP1Q8IU81 584 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 MAB21L3Q8N8X9 362 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 C12orf29Q8N999 325 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 SLC4A11Q8NBS3 891 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 EHBP1Q8NDI1 1231 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 SLC2A14Q8TDB8 520 aa10.43□□□□□ -0.74
NUP98-220ENST00000533346 USP13Q92995 863 aaPredicted RBP10.43□□□□□ -0.74
NUP98-220ENST00000533346 ELMO3Q96BJ8 720 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms