RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 TTC39CQ8N584 583 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 DDX1Q92499 740 aaKnown RBP9.81□□□□□ -0.84
BDNF-216ENST00000532997 CMTM5Q96DZ9 223 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 PDCD2LQ9BRP1 358 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 GRID1Q9ULK0 1009 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 SP100P23497 879 aaPredicted RBP9.81□□□□□ -0.84
BDNF-216ENST00000532997 EIF4BP23588 611 aaKnown RBP9.81□□□□□ -0.84
BDNF-216ENST00000532997 ELK3P41970 407 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 KLF1Q13351 362 aaPredicted RBP9.81□□□□□ -0.84
BDNF-216ENST00000532997 PGM5Q15124 567 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 MAPK6Q16659 721 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 SMTNL2Q2TAL5 461 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.81□□□□□ -0.84
BDNF-216ENST00000532997 ANO7Q6IWH7 933 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 EP400NLQ6ZTU2 488 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 PRUNE1Q86TP1 453 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 ZNF483Q8TF39 744 aaPredicted RBP9.81□□□□□ -0.84
BDNF-216ENST00000532997 ACSF2Q96CM8 615 aaPredicted RBP9.81□□□□□ -0.84
BDNF-216ENST00000532997 ZNF333Q96JL9 665 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 FAM167AQ96KS9 214 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 PRMT6Q96LA8 375 aaPredicted RBP9.81□□□□□ -0.84
BDNF-216ENST00000532997 FBXL18Q96ME1 805 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 KCNK16Q96T55 309 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 C2orf40Q9H1Z8 148 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 ARL8BQ9NVJ2 186 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 HESX1Q9UBX0 185 aa9.81□□□□□ -0.84
BDNF-216ENST00000532997 NKX1-2Q9UD57 310 aaPredicted RBP9.81□□□□□ -0.84
BDNF-216ENST00000532997 APOC4-APOC2K7ER74 178 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 APOL1O14791 398 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 MAGEC1O60732 1142 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 APOC2P02655 101 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 CETPP11597 493 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 ZFXP17010 805 aaPredicted RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 NCF2P19878 526 aaPredicted RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 MMP8P22894 467 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 CNTFP26441 200 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 GCLCP48506 637 aaPredicted RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 ACAP1Q15027 740 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 FAM102AQ5T9C2 384 aaPredicted RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 CWF19L1Q69YN2 538 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 POTEAQ6S8J7 498 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 NDUFAF2Q8N183 169 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 PLEKHO2Q8TD55 490 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 LRGUKQ96M69 825 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 SRPK1Q96SB4 655 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 TARS2Q9BW92 718 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 CADM1Q9BY67 442 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 TMEM150BA6NC51 233 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 F8VP50 259 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 TRDMT1O14717 391 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 KCNN4O15554 427 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 PTPN7P35236 360 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 C1orf220Q5T0J3 134 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 UBAP2Q5T6F2 1119 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 THEMIS2Q5TEJ8 643 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 DCAF15Q66K64 600 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 WDR49Q8IV35 697 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 AFAP1L2Q8N4X5 818 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 DENND1AQ8TEH3 1009 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 RPF1Q9H9Y2 349 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 METTL5Q9NRN9 209 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 PCMTD2Q9NV79 361 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 SOX13Q9UN79 622 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 NOP56O00567 594 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 CALCAP01258 141 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 RPL22P35268 128 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 COPAP53621 1224 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 FAAP100Q0VG06 881 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 FASTKD3Q14CZ7 662 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 MMEL1Q495T6 779 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 ATP13A4Q4VNC1 1196 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 MDH1BQ5I0G3 518 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 CYP4A22Q5TCH4 519 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 TDRD10Q5VZ19 366 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 NIM1KQ8IY84 436 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 RFWD2Q8NHY2 731 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 RAB3IL1Q8TBN0 382 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 TMEM143Q96AN5 459 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 LBHD1Q9BQE6 289 aaPredicted RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 NGRNQ9NPE2 291 aaKnown RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 PXMP2Q9NR77 195 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 MARCOQ9UEW3 520 aaPredicted RBP9.8□□□□□ -0.84
BDNF-216ENST00000532997 RABGEF1Q9UJ41 708 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 HEY1Q9Y5J3 304 aa9.8□□□□□ -0.84
BDNF-216ENST00000532997 COL4A1P02462 1669 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 KBTBD13C9JR72 458 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 GNAZP19086 355 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 AQP5P55064 265 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 BAATQ14032 418 aaPredicted RBP9.79□□□□□ -0.84
BDNF-216ENST00000532997 KHDC1Q4VXA5 237 aaKnown RBP9.79□□□□□ -0.84
BDNF-216ENST00000532997 EFHC1Q5JVL4 640 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 SH3BP5LQ7L8J4 393 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 SIAH1Q8IUQ4 282 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 LRRC39Q96DD0 335 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 NTPCRQ9BSD7 190 aaKnown RBP9.79□□□□□ -0.84
BDNF-216ENST00000532997 XAB2Q9HCS7 855 aaKnown RBP9.79□□□□□ -0.84
BDNF-216ENST00000532997 CISHQ9NSE2 258 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 SNCAIPQ9Y6H5 919 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 SPATA31A6Q5VVP1 1343 aa9.79□□□□□ -0.84
BDNF-216ENST00000532997 ATRNL1Q5VV63 1379 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms