RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 GPC2Q8N158 579 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 PIP4K2CQ8TBX8 421 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 ZBTB18Q99592 522 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 NSMCE4AQ9NXX6 385 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 NVLO15381 856 aaKnown RBP15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 GLRA2P23416 452 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 RFX8Q6ZV50 586 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 PURBQ96QR8 312 aaKnown RBP15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 NAT9Q9BTE0 207 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 TSPAN16Q9UKR8 245 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 POLIQ9UNA4 740 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 FZD1Q9UP38 647 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 AP4E1Q9UPM8 1137 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 NAALADL1Q9UQQ1 740 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 IGKV6D-41A0A0C4DH26 115 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 IGF2BP3O00425 579 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 ZNF286BP0CG31 522 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 NDST1P52848 882 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 PPATQ06203 517 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 ITGB3BPQ13352 177 aaPredicted RBP15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 VEPH1Q14D04 833 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 ARID3BQ8IVW6 561 aaPredicted RBP15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 DCP1BQ8IZD4 617 aaKnown RBP15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 PGM2Q96G03 612 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 OSMRQ99650 979 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 TASP1Q9H6P5 420 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 NFASCO94856 1347 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 ASTN2O75129 1339 aaPredicted RBP15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 PDHA1P08559 390 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 PAEPP09466 180 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 SKOR1P84550 965 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 MDH1BQ5I0G3 518 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 FBXO47Q5MNV8 452 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 RABGAP1LQ5R372 815 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 FAM131BQ86XD5 332 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 CCNJLQ8IV13 435 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 CHST7Q9NS84 486 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 RPS6KL1Q9Y6S9 549 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 RBAK-RBAKDNI3L0D1 243 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 B3GAT3O94766 335 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 CDH8P55286 799 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 MAPRE1Q15691 268 aaKnown RBP15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 CHI3L2Q15782 390 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 SPDYCQ5MJ68 293 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 ADGRF2Q8IZF7 708 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 ARHGEF38Q9NXL2 777 aa15.92■□□□□ 0.14
PCDHA3-202ENST00000532566 TLR2O60603 784 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 MAPRE2Q15555 327 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 HGSNATQ68CP4 663 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 RIOX2Q8IUF8 465 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 C12orf56Q8IXR9 622 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 MREGQ8N565 214 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 IPMKQ8NFU5 416 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 HES6Q96HZ4 224 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 FGD4Q96M96 766 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 FAM167BQ9BTA0 163 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 CACYBPQ9HB71 228 aaKnown RBP15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 L3MBTL1Q9Y468 752 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 CYB561D2O14569 222 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 ZNF263O14978 683 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 PPFIA2O75334 1257 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 F9P00740 461 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 CLK2P49760 499 aaKnown RBP15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 SLFN11Q7Z7L1 901 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 RPAINQ86UA6 219 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 KATNAL2Q8IYT4 538 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 WDCPQ9H6R7 721 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 LRRC37A3O60309 1634 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 STRNO43815 780 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 CYP1A2P05177 515 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 FMO1Q01740 532 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 BST2Q10589 180 aaKnown RBP15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 ZCWPW2Q504Y3 356 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 HABP4Q5JVS0 413 aaKnown RBP15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 TBCBQ99426 244 aa15.91■□□□□ 0.14
PCDHA3-202ENST00000532566 ZBTB24O43167 697 aaPredicted RBP15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 KLHL2O95198 593 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 NCKAP1LP55160 1127 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 IL1RL1Q01638 556 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 GRIK4Q16099 956 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 TSPAN17Q96FV3 270 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 VTA1Q9NP79 307 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 SETD4Q9NVD3 440 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 B2RBV5 119 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 NKRFO15226 690 aaKnown RBP eCLIP15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 ODC1P11926 461 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 PECAM1P16284 738 aaPredicted RBP15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 CCND1P24385 295 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 RTP1P59025 263 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 OVGP1Q12889 678 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 PTK6Q13882 451 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 VGLL4Q14135 290 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 ZACNQ401N2 412 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 AADACL2Q6P093 401 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 DENND5BQ6ZUT9 1274 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 ANO5Q75V66 913 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 SLC26A11Q86WA9 606 aa15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 EML4Q9HC35 981 aaKnown RBP15.9■□□□□ 0.14
PCDHA3-202ENST00000532566 SPATS2LQ9NUQ6 558 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms