RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 RNF43Q68DV7 783 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 VSTM1Q6UX27 236 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 SYT13Q7L8C5 426 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 HPS3Q969F9 1004 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 DHX58Q96C10 678 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 PKMYT1Q99640 499 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 TPSD1Q9BZJ3 242 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 LINC00597Q9H2U6 94 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 ZSCAN16Q9H4T2 348 aaPredicted RBP16.23■□□□□ 0.19
BRPF3-210ENST00000532538 KIAA1586Q9HCI6 787 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 VPS45Q9NRW7 570 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 PCDHGA5Q9Y5G8 931 aa16.23■□□□□ 0.19
BRPF3-210ENST00000532538 A0A087X0B3 334 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.22■□□□□ 0.19
BRPF3-210ENST00000532538 FRMD3A2A2Y4 597 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 PHACTR2O75167 634 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 CYP2J2P51589 502 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 PLK5Q496M5 336 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 USP39Q53GS9 565 aaKnown RBP16.22■□□□□ 0.19
BRPF3-210ENST00000532538 TDRD10Q5VZ19 366 aaKnown RBP16.22■□□□□ 0.19
BRPF3-210ENST00000532538 FAM171BQ6P995 826 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 WDR49Q8IV35 697 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 CCDC33Q8N5R6 958 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 CCDC127Q96BQ5 260 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 TNMDQ9H2S6 317 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 CRTAC1Q9NQ79 661 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 RXFP3Q9NSD7 469 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 GCNT4Q9P109 453 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 NCOR2Q9Y618 2525 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 CACNA1BQ00975 2339 aa16.22■□□□□ 0.19
BRPF3-210ENST00000532538 MYO18AQ92614 2054 aaKnown RBP16.22■□□□□ 0.19
BRPF3-210ENST00000532538 PTPRJQ12913 1337 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 LEFTY2O00292 366 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 SCAMP3O14828 347 aaKnown RBP16.21■□□□□ 0.19
BRPF3-210ENST00000532538 CLIC2O15247 247 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 CAVIN2O95810 425 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 WARSP23381 471 aaKnown RBP16.21■□□□□ 0.19
BRPF3-210ENST00000532538 LIMK1P53667 647 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 ANO7Q6IWH7 933 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 TRAPPC11Q7Z392 1133 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 NELFCDQ8IXH7 590 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 GLIS3Q8NEA6 775 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 CXorf38Q8TB03 319 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 KBTBD7Q8WVZ9 684 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 PCED1BQ96HM7 432 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 ZC3H10Q96K80 434 aaKnown RBP16.21■□□□□ 0.19
BRPF3-210ENST00000532538 SPATA17Q96L03 361 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 ZNF396Q96N95 335 aaPredicted RBP16.21■□□□□ 0.19
BRPF3-210ENST00000532538 SLITRK1Q96PX8 696 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 DUSP15Q9H1R2 295 aaPredicted RBP16.21■□□□□ 0.19
BRPF3-210ENST00000532538 SMPD4Q9NXE4 827 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 NXF1Q9UBU9 619 aaKnown RBP16.21■□□□□ 0.19
BRPF3-210ENST00000532538 ANGPTL2Q9UKU9 493 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 ARHGAP26Q9UNA1 814 aa16.21■□□□□ 0.19
BRPF3-210ENST00000532538 F8VP50 259 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 SLC9A3R1O14745 358 aaPredicted RBP16.2■□□□□ 0.18
BRPF3-210ENST00000532538 SPTLC2O15270 562 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 STX6O43752 255 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 MBL2P11226 248 aaPredicted RBP16.2■□□□□ 0.18
BRPF3-210ENST00000532538 SNRNP35Q16560 246 aaKnown RBP16.2■□□□□ 0.18
BRPF3-210ENST00000532538 WDR72Q3MJ13 1102 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 FAM26FQ5R3K3 315 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 N4BP2L1Q5TBK1 243 aaPredicted RBP16.2■□□□□ 0.18
BRPF3-210ENST00000532538 TCEAL6Q6IPX3 200 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 FILIP1Q7Z7B0 1213 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 MYCBPAPQ8TBZ2 947 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 TCEAL3Q969E4 200 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 MRPL45Q9BRJ2 306 aaKnown RBP16.2■□□□□ 0.18
BRPF3-210ENST00000532538 MED10Q9BTT4 135 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 EDEM2Q9BV94 578 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 BCCIPQ9P287 314 aaKnown RBP eCLIP16.2■□□□□ 0.18
BRPF3-210ENST00000532538 TFIP11Q9UBB9 837 aaKnown RBP16.2■□□□□ 0.18
BRPF3-210ENST00000532538 CPQQ9Y646 472 aa16.2■□□□□ 0.18
BRPF3-210ENST00000532538 TPRP12270 2363 aaKnown RBP16.19■□□□□ 0.18
BRPF3-210ENST00000532538 A8MXQ7 604 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 EIF3DO15371 548 aaKnown RBP eCLIP16.19■□□□□ 0.18
BRPF3-210ENST00000532538 MAP3K13O43283 966 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 ALDH1A2O94788 518 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 PFKLP17858 780 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 PPP3CCP48454 512 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 DHPSP49366 369 aaPredicted RBP16.19■□□□□ 0.18
BRPF3-210ENST00000532538 USP46P62068 366 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 TAF10Q12962 218 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
BRPF3-210ENST00000532538 C11orf74Q86VG3 221 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 PGBD3Q8N328 593 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 IQUBQ8NA54 791 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
BRPF3-210ENST00000532538 CGRRF1Q99675 332 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 CUEDC2Q9H467 287 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 EBF1Q9UH73 591 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 MTMR6Q9Y217 621 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 ATP8B3O60423 1300 aa16.19■□□□□ 0.18
BRPF3-210ENST00000532538 CST3P01034 146 aaPredicted RBP16.18■□□□□ 0.18
BRPF3-210ENST00000532538 APODP05090 189 aa16.18■□□□□ 0.18
BRPF3-210ENST00000532538 PTPN1P18031 435 aaKnown RBP16.18■□□□□ 0.18
BRPF3-210ENST00000532538 TIE1P35590 1138 aa16.18■□□□□ 0.18
BRPF3-210ENST00000532538 BIRC3Q13489 604 aa16.18■□□□□ 0.18
BRPF3-210ENST00000532538 FOXD4L6Q3SYB3 417 aaPredicted RBP16.18■□□□□ 0.18
BRPF3-210ENST00000532538 PLA2G2CQ5R387 149 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms