RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SETSIPP0DME0 302 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 CD19P15391 556 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 KLRC2P26717 231 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 TUFMP49411 452 aaKnown RBP13.25□□□□□ -0.29
COPB1-208ENST00000532088 CLCN4P51793 760 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 CDR2Q01850 454 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 DUSP6Q16828 381 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 SLC39A12Q504Y0 691 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 PKDCCQ504Y2 493 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 PPP1R26Q5T8A7 1209 aaPredicted RBP13.25□□□□□ -0.29
COPB1-208ENST00000532088 PPP1R2P3Q6NXS1 205 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 ELMSAN1Q6PJG2 1045 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 TRIM72Q6ZMU5 477 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 FAM35AQ86V20 835 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 SPATA2LQ8IUW3 424 aaPredicted RBP13.25□□□□□ -0.29
COPB1-208ENST00000532088 C12orf29Q8N999 325 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 ANKRD52Q8NB46 1076 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 ARMC2Q8NEN0 867 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 SMARCD1Q96GM5 515 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 SYT11Q9BT88 431 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 B3GNT5Q9BYG0 378 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 ZNF518BQ9C0D4 1074 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 LHX5Q9H2C1 402 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 PLEKHA4Q9H4M7 779 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 CSNK1G1Q9HCP0 422 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 TMLHEQ9NVH6 421 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 HESX1Q9UBX0 185 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 NOCTQ9UK39 431 aaKnown RBP13.25□□□□□ -0.29
COPB1-208ENST00000532088 FBXW11Q9UKB1 542 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 LAMA3Q16787 3333 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 SSU72P8A0A1W2PR75 194 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 THAP12O43422 761 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 NCK2O43639 380 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 LSM8O95777 96 aaKnown RBP13.24□□□□□ -0.29
COPB1-208ENST00000532088 GLUD1P00367 558 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 POU2F2P09086 479 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 OR4Q2P0C623 313 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 HAPLN1P10915 354 aaPredicted RBP13.24□□□□□ -0.29
COPB1-208ENST00000532088 RPL17P18621 184 aaKnown RBP13.24□□□□□ -0.29
COPB1-208ENST00000532088 BRD2P25440 801 aaKnown RBP13.24□□□□□ -0.29
COPB1-208ENST00000532088 CDH5P33151 784 aaPredicted RBP13.24□□□□□ -0.29
COPB1-208ENST00000532088 BCAT1P54687 386 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 ADKP55263 362 aaKnown RBP13.24□□□□□ -0.29
COPB1-208ENST00000532088 SLC8A3P57103 927 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 KLHL30Q0D2K2 578 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 ORC1Q13415 861 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 GRIN2CQ14957 1233 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 E4F1Q66K89 784 aaPredicted RBP13.24□□□□□ -0.29
COPB1-208ENST00000532088 HGSNATQ68CP4 663 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 CCDC149Q6ZUS6 474 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 PAQR9Q6ZVX9 377 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 NOP9Q86U38 636 aaKnown RBP13.24□□□□□ -0.29
COPB1-208ENST00000532088 TCEAL8Q8IYN2 117 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 SLC2A14Q8TDB8 520 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 SLC22A17Q8WUG5 538 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 TFAP2BQ92481 460 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 DUSP16Q9BY84 665 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 PRDM12Q9H4Q4 367 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 CYLDQ9NQC7 956 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 FKBPLQ9UIM3 349 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 TSPAN16Q9UKR8 245 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 CEP83Q9Y592 693 aa13.24□□□□□ -0.29
COPB1-208ENST00000532088 ATG2AQ2TAZ0 1938 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 TRIOBPQ9H2D6 2365 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 RFXAPO00287 272 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 TGM5O43548 720 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 VNN2O95498 520 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 FAM200BP0CF97 657 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 CCDC130P13994 396 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 NPR3P17342 541 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 HOXA9P31269 272 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 ELF1P32519 619 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 CA8P35219 290 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 SLC19A1P41440 591 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 ARPP19P56211 112 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 RPL10AP62906 217 aaKnown RBP13.23□□□□□ -0.29
COPB1-208ENST00000532088 CYP27A1Q02318 531 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 ADCY1Q08828 1119 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 CCDC173Q0VFZ6 552 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 BST2Q10589 180 aaKnown RBP13.23□□□□□ -0.29
COPB1-208ENST00000532088 PLD1Q13393 1074 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 KCNC3Q14003 757 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 WDR59Q6PJI9 974 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 TMEM184AQ6ZMB5 413 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 VPS36Q86VN1 386 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 SPC24Q8NBT2 197 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 STK32AQ8WU08 396 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 SPATA17Q96L03 361 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 C8orf48Q96LL4 319 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 GAS2L1Q99501 681 aaPredicted RBP13.23□□□□□ -0.29
COPB1-208ENST00000532088 AGPAT1Q99943 283 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 ZSWIM1Q9BR11 485 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 MED10Q9BTT4 135 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 HAUS4Q9H6D7 363 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 TLE6Q9H808 572 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 PRM3Q9NNZ6 103 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 DMAP1Q9NPF5 467 aaPredicted RBP13.23□□□□□ -0.29
COPB1-208ENST00000532088 FAM49BQ9NUQ9 324 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 MTCH2Q9Y6C9 303 aa13.23□□□□□ -0.29
COPB1-208ENST00000532088 PTPRDP23468 1912 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms