RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 GIPC2Q8TF65 315 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 TRMT2BQ96GJ1 504 aaKnown RBP12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 NOX5Q96PH1 765 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 SLITRK1Q96PX8 696 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 FBXO44Q9H4M3 255 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 CSNK1G1Q9HCP0 422 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 WDR6Q9NNW5 1121 aaKnown RBP12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 COMMD8Q9NX08 183 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 AJAP1Q9UKB5 411 aaPredicted RBP12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 MAGED2Q9UNF1 606 aaPredicted RBP12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 MRPS23Q9Y3D9 190 aaKnown RBP12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 PTPRDP23468 1912 aa12.52□□□□□ -0.41
PPFIA1-220ENST00000532024 RNF225M0QZC1 329 aaPredicted RBP12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 XPO1O14980 1071 aaKnown RBP12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 EPHB6O15197 1021 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 GFPT2O94808 682 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 RHOP08100 348 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 MYL4P12829 197 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 FSHRP23945 695 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 PBX1P40424 430 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 JAM2P57087 298 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 SNX16P57768 344 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 TFF2Q03403 129 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 SMAD2Q15796 467 aaKnown RBP12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 TSR1Q2NL82 804 aaKnown RBP12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 ARHGAP15Q53QZ3 475 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 CLEC20AQ6ZU45 233 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 PAQR9Q6ZVX9 377 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 OTOP3Q7RTS5 596 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 PDZD8Q8NEN9 1154 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 GPR152Q8TDT2 470 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 SUSD6Q92537 303 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 ACSF2Q96CM8 615 aaPredicted RBP12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 UBXN6Q9BZV1 441 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 ZMYM5Q9UJ78 669 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 LUC7L2Q9Y383 392 aaKnown RBP12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 NR2E1Q9Y466 385 aa12.51□□□□□ -0.41
PPFIA1-220ENST00000532024 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 MICAL2O94851 1124 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 PNMA6AP0CW24 399 aaPredicted RBP12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 CYP11B1P15538 503 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 YWHAQP27348 245 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 CLCN1P35523 988 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 PPP3CCP48454 512 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 GPR15P49685 360 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 SLC5A3P53794 718 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 EPHA5P54756 1037 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 SFMBT2Q5VUG0 894 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 SDHAF4Q5VUM1 108 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 GET4Q7L5D6 327 aaPredicted RBP12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 SLC47A2Q86VL8 602 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 VSTM4Q8IW00 320 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 SIX6OS1Q8N1H7 587 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 MSANTD4Q8NCY6 345 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 TFAP2BQ92481 460 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 MRPS31Q92665 395 aaKnown RBP12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 MYRFLQ96LU7 910 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 KCNK16Q96T55 309 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 SMOQ99835 787 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 PHF7Q9BWX1 381 aaPredicted RBP12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 GPR88Q9GZN0 384 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 LRRC4Q9HBW1 653 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 PRDM6Q9NQX0 595 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 HCFC1R1Q9NWW0 138 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 DNMT3BQ9UBC3 853 aaKnown RBP12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 PRKAG3Q9UGI9 489 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 PCDHGC3Q9UN70 934 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 USTQ9Y2C2 406 aa12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 ZFP37Q9Y6Q3 630 aaPredicted RBP12.5□□□□□ -0.41
PPFIA1-220ENST00000532024 REV3LO60673 3130 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 LRRC53A6NM62 1247 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 LSM8O95777 96 aaKnown RBP12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 GABRR2P28476 465 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 PLA2G4AP47712 749 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 CACNA2D1P54289 1103 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 ZBED6P86452 979 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 ARID5AQ03989 594 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 PDE4CQ08493 712 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 IFRD2Q12894 506 aaPredicted RBP12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 ASIC2Q16515 512 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 PTPN21Q16825 1174 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 TRIM72Q6ZMU5 477 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 TTC30AQ86WT1 665 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 TDRD5Q8NAT2 981 aaKnown RBP12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 TMEM35BQ8NCS4 154 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 UBA3Q8TBC4 463 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 EPS8L1Q8TE68 723 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 OVCA2Q8WZ82 227 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 FBXO32Q969P5 355 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 MRFAP1L1Q96HT8 127 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 ASB2Q96Q27 587 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 TTLL2Q9BWV7 592 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 TTYH3Q9C0H2 523 aa12.49□□□□□ -0.41
PPFIA1-220ENST00000532024 ATXN3LQ9H3M9 355 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms