RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 DNAJB5O75953 348 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 USP1O94782 785 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 UNC5CO95185 931 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 F13BP05160 661 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 FAM90A15PP0C7V4 464 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 FAM90A14PP0C7W9 464 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 PNLIPP16233 465 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 PECAM1P16284 738 aaPredicted RBP4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 PCSK1P29120 753 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 SERPINA4P29622 427 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 EEF1DP29692 281 aaKnown RBP4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 GRK5P34947 590 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 THBS2P35442 1172 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 GPD2P43304 727 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 UCP3P55916 312 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 SNX16P57768 344 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 ANTXR2P58335 489 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 NLRP5P59047 1200 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 RPP30P78346 268 aaKnown RBP4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 CD83Q01151 205 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 PRKCQQ04759 706 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 TCF15Q12870 199 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 AIMP2Q13155 320 aaKnown RBP4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 ADAM15Q13444 863 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 NPY5RQ15761 445 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 TCP11X2Q5H9J9 407 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 PLEKHS1Q5SXH7 462 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 RNF43Q68DV7 783 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 FCRL6Q6DN72 434 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 SEM1Q6ZVN7 128 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 H1FNTQ75WM6 255 aaPredicted RBP4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 ZC3H18Q86VM9 953 aaKnown RBP4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 IQCA1Q86XH1 822 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 ERC1Q8IUD2 1116 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 TAGAPQ8N103 731 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 CSGALNACT1Q8TDX6 532 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 MISP3Q96FF7 219 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 WRNIP1Q96S55 665 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 TSPAN18Q96SJ8 248 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 SPATA5L1Q9BVQ7 753 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 OSBPL1AQ9BXW6 950 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 MS4A7Q9GZW8 240 aaPredicted RBP4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 C2orf40Q9H1Z8 148 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 VPS16Q9H269 839 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 TRPV4Q9HBA0 871 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 BARX1Q9HBU1 254 aaPredicted RBP4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 TNFRSF12AQ9NP84 129 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 CCDC177Q9NQR7 707 aaPredicted RBP4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 TLR9Q9NR96 1032 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 HCFC1R1Q9NWW0 138 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 STOML1Q9UBI4 398 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 EBF1Q9UH73 591 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 VAV3Q9UKW4 847 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 KNSTRNQ9Y448 316 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 PSAT1Q9Y617 370 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 U3KQE9 123 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 KAT6BQ8WYB5 2073 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 A0A0G2JNJ9 132 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 H0Y626 953 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 RAB27BO00194 218 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 VILLO15195 856 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 TULP3O75386 442 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 ITGA10O75578 1167 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 PGM3O95394 542 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 LARGE1O95461 756 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 TNNT1P13805 278 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 STMN1P16949 149 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 FSTP19883 344 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 TM4SF1P30408 202 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 BSGP35613 385 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 TNNT3P45378 269 aaPredicted RBP4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 AFF3P51826 1226 aaKnown RBP4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 SATB1Q01826 763 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 PTH1RQ03431 593 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 TFCP2Q12800 502 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 BFSP1Q12934 665 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 RPS6KA2Q15349 733 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 PRAMEF14Q5SWL7 426 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 DEPDC1Q5TB30 811 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 LIPMQ5VYY2 423 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 DGAT2L7PQ6IED9 249 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 RINT1Q6NUQ1 792 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 INTS5Q6P9B9 1019 aaKnown RBP4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 ETV3LQ6ZN32 361 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 ZNF365Q70YC5 407 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 SDCCAG8Q86SQ7 713 aaPredicted RBP4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 SRBD1Q8N5C6 995 aaKnown RBP4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 AVL9Q8NBF6 648 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 PIK3C3Q8NEB9 887 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 APPL2Q8NEU8 664 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 LPPQ93052 612 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 SCAMP4Q969E2 229 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 JAKMIP2Q96AA8 810 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 ZNF845Q96IR2 970 aaPredicted RBP4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 ALPK1Q96QP1 1244 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 BRD8Q9H0E9 1235 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 XAB2Q9HCS7 855 aaKnown RBP4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 SEPT11Q9NVA2 429 aaKnown RBP4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 FAM30AQ9NZY2 134 aa4.75□□□□□ -1.65
AC055878.1-201ENST00000531858 CEP72Q9P209 647 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms