RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 PPP1R13BQ96KQ4 1090 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 NOX5Q96PH1 765 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 CPXM1Q96SM3 734 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 CRISPLD1Q9H336 500 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 ADAM22Q9P0K1 906 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 TJP2Q9UDY2 1190 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 AFF4Q9UHB7 1163 aaKnown RBP20.11■□□□□ 0.81
SMPD1-205ENST00000531303 F8VP50 259 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 XPO1O14980 1071 aaKnown RBP20.11■□□□□ 0.81
SMPD1-205ENST00000531303 ADH1AP07327 375 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 CCDC175P0C221 793 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 SMARCB1Q12824 385 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 DDR2Q16832 855 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 CFAP221Q4G0U5 840 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 PTPN20Q4JDL3 420 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 PIGZQ86VD9 579 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 C17orf53Q8N3J3 647 aaPredicted RBP20.11■□□□□ 0.81
SMPD1-205ENST00000531303 C2orf15Q8WU43 125 aaKnown RBP20.11■□□□□ 0.81
SMPD1-205ENST00000531303 FUBP3Q96I24 572 aaKnown RBP eCLIP20.11■□□□□ 0.81
SMPD1-205ENST00000531303 ISCUQ9H1K1 167 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 CYP4F11Q9HBI6 524 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 DMAP1Q9NPF5 467 aaPredicted RBP20.11■□□□□ 0.81
SMPD1-205ENST00000531303 LUC7LQ9NQ29 371 aaKnown RBP20.11■□□□□ 0.81
SMPD1-205ENST00000531303 TRMT1Q9NXH9 659 aaKnown RBP20.11■□□□□ 0.81
SMPD1-205ENST00000531303 CHORDC1Q9UHD1 332 aaPredicted RBP20.11■□□□□ 0.81
SMPD1-205ENST00000531303 PPP2R2CQ9Y2T4 447 aa20.11■□□□□ 0.81
SMPD1-205ENST00000531303 PLXNA3P51805 1871 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 CHD7Q9P2D1 2997 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 ATMINO43313 823 aaPredicted RBP20.1■□□□□ 0.81
SMPD1-205ENST00000531303 ABLIM3O94929 683 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 SEC24AO95486 1093 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 HAPLN1P10915 354 aaPredicted RBP20.1■□□□□ 0.81
SMPD1-205ENST00000531303 LCP1P13796 627 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 LRIT3Q3SXY7 679 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 TPGS2Q68CL5 300 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 LLGL2Q6P1M3 1020 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 PHF13Q86YI8 300 aaPredicted RBP20.1■□□□□ 0.81
SMPD1-205ENST00000531303 MCOLN2Q8IZK6 566 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 STKLD1Q8NE28 680 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 GPR152Q8TDT2 470 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 ZNF653Q96CK0 615 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 THAP2Q9H0W7 228 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 ZNF576Q9H609 170 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 ABCB6Q9NP58 842 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 MYO1AQ9UBC5 1043 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 IRAK3Q9Y616 596 aa20.1■□□□□ 0.81
SMPD1-205ENST00000531303 ATG2AQ2TAZ0 1938 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 A0A1W2PPC1 479 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 RCCD1A6NED2 376 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 E5RJQ4 531 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 PRRG1O14668 218 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 PER2O15055 1255 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 TGM5O43548 720 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 GABBR2O75899 941 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 ERBB2P04626 1255 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 ATF2P15336 505 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 MMP8P22894 467 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 ELF1P32519 619 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 PLA2G4AP47712 749 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 C10orf76Q5T2E6 689 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 VSTM1Q6UX27 236 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 MON1BQ7L1V2 547 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 RBM23Q86U06 439 aaKnown RBP20.09■□□□□ 0.81
SMPD1-205ENST00000531303 MSANTD4Q8NCY6 345 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 IPO4Q8TEX9 1081 aaKnown RBP20.09■□□□□ 0.81
SMPD1-205ENST00000531303 SLC4A5Q9BY07 1137 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 MIS12Q9H081 205 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 CSNK1G1Q9HCP0 422 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 ZKSCAN5Q9Y2L8 839 aa20.09■□□□□ 0.81
SMPD1-205ENST00000531303 COL4A4P53420 1690 aaPredicted RBP20.09■□□□□ 0.81
SMPD1-205ENST00000531303 ANKRD62A6NC57 917 aa20.08■□□□□ 0.81
SMPD1-205ENST00000531303 MAGEA11P43364 429 aa20.08■□□□□ 0.81
SMPD1-205ENST00000531303 VAV2P52735 878 aa20.08■□□□□ 0.81
SMPD1-205ENST00000531303 IFRD2Q12894 506 aaPredicted RBP20.08■□□□□ 0.81
SMPD1-205ENST00000531303 GPRIN1Q7Z2K8 1008 aa20.08■□□□□ 0.81
SMPD1-205ENST00000531303 CTNNBL1Q8WYA6 563 aaPredicted RBP20.08■□□□□ 0.81
SMPD1-205ENST00000531303 C18orf8Q96DM3 657 aa20.08■□□□□ 0.81
SMPD1-205ENST00000531303 LRRC4Q9HBW1 653 aa20.08■□□□□ 0.81
SMPD1-205ENST00000531303 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.08■□□□□ 0.81
SMPD1-205ENST00000531303 TRIM10Q9UDY6 481 aa20.08■□□□□ 0.81
SMPD1-205ENST00000531303 GOLGA8SH3BPF8 625 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 TRIM66O15016 1216 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 CALB1P05937 261 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 RRM1P23921 792 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 C1QBPQ07021 282 aaKnown RBP20.07■□□□□ 0.8
SMPD1-205ENST00000531303 ADIGQ0VDE8 80 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 PTP4A2Q12974 167 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 LIN9Q5TKA1 542 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 OR6B2Q6IFH4 312 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 PDE12Q6L8Q7 609 aaKnown RBP20.07■□□□□ 0.8
SMPD1-205ENST00000531303 PPP1R2P3Q6NXS1 205 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 SCUBE3Q8IX30 993 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 GIPC2Q8TF65 315 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 STK32AQ8WU08 396 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 ARHGEF26Q96DR7 871 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 HSFY1Q96LI6 401 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 LACRTQ9GZZ8 138 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 LMAN2LQ9H0V9 348 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 LZTFL1Q9NQ48 299 aa20.07■□□□□ 0.8
SMPD1-205ENST00000531303 CNOT8Q9UFF9 292 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms