RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 USP18Q9UMW8 372 aa23.75■■□□□ 1.39
TRAPPC4-210ENST00000531290 F8VP50 259 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 HRO43593 1189 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 PFKFB1P16118 471 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 PFKLP17858 780 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 DRD1P21728 446 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 SDHBP21912 280 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 HOXA6P31267 233 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 GJA4P35212 333 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 PPP3CCP48454 512 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 GALK1P51570 392 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 USP46P62068 366 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 NR1H3Q13133 447 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 TDRD10Q5VZ19 366 aaKnown RBP23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 PARD3BQ8TEW8 1205 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 SPATA32Q96LK8 384 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 P2RY13Q9BPV8 354 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 C2orf42Q9NWW7 574 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 ARHGAP26Q9UNA1 814 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 NME7Q9Y5B8 376 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 WNT6Q9Y6F9 365 aa23.74■■□□□ 1.39
TRAPPC4-210ENST00000531290 OTOGLQ3ZCN5 2332 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 PATJQ8NI35 1801 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 ABL1P00519 1130 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 MYL1P05976 194 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 NOP14P78316 857 aaKnown RBP23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 KRT85P78386 507 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 LMNB2Q03252 620 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 USP4Q13107 963 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 NCOA4Q13772 614 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 RSPO4Q2I0M5 234 aaPredicted RBP23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 ZNF699Q32M78 642 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 SLC9A9Q8IVB4 645 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 B3GALNT2Q8NCR0 500 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 KIAA0895Q8NCT3 520 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 TTLL2Q9BWV7 592 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 DPEP3Q9H4B8 488 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 DMAC2Q9NW81 257 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 SLC8A2Q9UPR5 921 aa23.73■■□□□ 1.39
TRAPPC4-210ENST00000531290 LRRIQ3A6PVS8 624 aaPredicted RBP23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 PRR5-ARHGAP8B1AHC4 643 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 EGFP01133 1207 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 RETP07949 1114 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 ARHGAP8P85298 464 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 ZNF667Q5HYK9 610 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 CEP68Q76N32 757 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 PLEKHO2Q8TD55 490 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 CCDC47Q96A33 483 aaKnown RBP23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 CHFRQ96EP1 664 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 B3GNT5Q9BYG0 378 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 ZNF518BQ9C0D4 1074 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 VRTNQ9H8Y1 702 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 FBRSL1Q9HCM7 1045 aaKnown RBP23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 DLL3Q9NYJ7 618 aa23.72■■□□□ 1.39
TRAPPC4-210ENST00000531290 ZNF840PA6NDX5 716 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 PDXKO00764 312 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 RNF40O75150 1001 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 C4BPAP04003 597 aaKnown RBP23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 P4HA1P13674 534 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 TCF3P15923 654 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 CDH8P55286 799 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 CLDN10P78369 228 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 SRSF5Q13243 272 aaKnown RBP23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 EML3Q32P44 896 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 FBXO43Q4G163 708 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 WDR5BQ86VZ2 330 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 TMEM174Q8WUU8 243 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 CD101Q93033 1021 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 SLITRK1Q96PX8 696 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 LINC00597Q9H2U6 94 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 SMYD3Q9H7B4 428 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 TCHHQ07283 1943 aa23.71■■□□□ 1.39
TRAPPC4-210ENST00000531290 ATP8B3O60423 1300 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 CLDN5O00501 218 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 KIF20AO95235 890 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 NR3C1P04150 777 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 RPN1P04843 607 aaKnown RBP23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 SYKP43405 635 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 SPEM2Q0P670 501 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 TAF10Q12962 218 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 PKN3Q6P5Z2 889 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 NUP93Q8N1F7 819 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 TNIP3Q96KP6 325 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 MED10Q9BTT4 135 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 KCTD10Q9H3F6 313 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 HPSEQ9Y251 543 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 FRMD4BQ9Y2L6 1034 aa23.7■■□□□ 1.38
TRAPPC4-210ENST00000531290 LEFTY2O00292 366 aa23.69■■□□□ 1.38
TRAPPC4-210ENST00000531290 CALUO43852 315 aaPredicted RBP23.69■■□□□ 1.38
TRAPPC4-210ENST00000531290 NFATC1O95644 943 aa23.69■■□□□ 1.38
TRAPPC4-210ENST00000531290 TGM1P22735 817 aa23.69■■□□□ 1.38
TRAPPC4-210ENST00000531290 YWHAQP27348 245 aa23.69■■□□□ 1.38
TRAPPC4-210ENST00000531290 CACNA2D1P54289 1103 aa23.69■■□□□ 1.38
TRAPPC4-210ENST00000531290 IFRD2Q12894 506 aaPredicted RBP23.69■■□□□ 1.38
TRAPPC4-210ENST00000531290 SGSM1Q2NKQ1 1148 aa23.69■■□□□ 1.38
TRAPPC4-210ENST00000531290 CEP135Q66GS9 1140 aa23.69■■□□□ 1.38
TRAPPC4-210ENST00000531290 PARD6AQ9NPB6 346 aa23.69■■□□□ 1.38
TRAPPC4-210ENST00000531290 NUP210Q8TEM1 1887 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC4-210ENST00000531290 DCHS1Q96JQ0 3298 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms