RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 NFATC1O95644 943 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 F11P03951 625 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 SPATA31C1P0DKV0 1188 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 ODC1P11926 461 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 XRCC6P12956 609 aaKnown RBP eCLIP8.9□□□□□ -0.98
CD44-232ENST00000531118 HMGA1P17096 107 aaKnown RBP8.9□□□□□ -0.98
CD44-232ENST00000531118 CYP11B2P19099 503 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 TUFMP49411 452 aaKnown RBP8.9□□□□□ -0.98
CD44-232ENST00000531118 CDR1P51861 262 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 SH3BP2P78314 561 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 CFHR1Q03591 330 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 CALCRLQ16602 461 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 PLEKHG6Q3KR16 790 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 HSF5Q4G112 596 aaPredicted RBP8.9□□□□□ -0.98
CD44-232ENST00000531118 EARS2Q5JPH6 523 aaKnown RBP8.9□□□□□ -0.98
CD44-232ENST00000531118 EOGTQ5NDL2 527 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 PCSK4Q6UW60 755 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 MPZL3Q6UWV2 235 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 DSTYKQ6XUX3 929 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 SLC36A4Q6YBV0 504 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 MON1AQ86VX9 555 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 BPHLQ86WA6 291 aaPredicted RBP8.9□□□□□ -0.98
CD44-232ENST00000531118 SLC41A1Q8IVJ1 513 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 SFTPA1Q8IWL2 248 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 EFCAB13Q8IY85 973 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 IFT74Q96LB3 600 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 JAKMIP1Q96N16 626 aaKnown RBP8.9□□□□□ -0.98
CD44-232ENST00000531118 MRPL4Q9BYD3 311 aaKnown RBP8.9□□□□□ -0.98
CD44-232ENST00000531118 TMEM206Q9H813 350 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 KIAA1522Q9P206 1035 aaPredicted RBP8.9□□□□□ -0.98
CD44-232ENST00000531118 DACH1Q9UI36 760 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 GTF3C3Q9Y5Q9 886 aa8.9□□□□□ -0.98
CD44-232ENST00000531118 MGAQ8IWI9 3026 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 STK36Q9NRP7 1315 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 IGHV1OR15-9A0A0B4J2B8 117 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 ARHGEF35A5YM69 484 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 PYCARD-AS1I3L0S3 204 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 WNT7AO00755 349 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 PPEF2O14830 753 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 ADAM23O75077 832 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 MED24O75448 989 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 CYP17A1P05093 508 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 CXCL8P10145 99 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 PDIA3P30101 505 aaKnown RBP8.89□□□□□ -0.99
CD44-232ENST00000531118 GPR15P49685 360 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 GUCY2FP51841 1108 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 SKOR1P84550 965 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 NR1H3Q13133 447 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 DMP1Q13316 513 aaPredicted RBP8.89□□□□□ -0.99
CD44-232ENST00000531118 NOLC1Q14978 699 aaKnown RBP eCLIP8.89□□□□□ -0.99
CD44-232ENST00000531118 SLC10A6Q3KNW5 377 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 ARMCX5Q6P1M9 558 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 TAS1R3Q7RTX0 852 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 PGBD3Q8N328 593 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 GALNT15Q8N3T1 639 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 FBXL16Q8N461 479 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 SPPL2BQ8TCT7 592 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 NXPE2Q96DL1 559 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 YTHDC1Q96MU7 727 aaKnown RBP8.89□□□□□ -0.99
CD44-232ENST00000531118 SLC22A12Q96S37 553 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 TARS2Q9BW92 718 aaKnown RBP8.89□□□□□ -0.99
CD44-232ENST00000531118 ZCWPW1Q9H0M4 648 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 TTC12Q9H892 705 aaPredicted RBP8.89□□□□□ -0.99
CD44-232ENST00000531118 TRPC7Q9HCX4 862 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 TUFT1Q9NNX1 390 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 ZDHHC4Q9NPG8 344 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 CALCOCO1Q9P1Z2 691 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 SUSD2Q9UGT4 822 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 PCDHA12Q9UN75 941 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 ATMQ13315 3056 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 MYLKQ15746 1914 aa8.89□□□□□ -0.99
CD44-232ENST00000531118 SPTAN1Q13813 2472 aaKnown RBP8.89□□□□□ -0.99
CD44-232ENST00000531118 NBPF19A0A087WUL8 3843 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 PIEZO2Q9H5I5 2752 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 TEX51A0A1B0GUA7 166 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 FAM149AA5PLN7 773 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 CAPN8A6NHC0 703 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 E9PAM4 449 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 K7ERI5 159 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 TLX3O43711 291 aaPredicted RBP8.88□□□□□ -0.99
CD44-232ENST00000531118 NEMFO60524 1076 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 CKMP06732 381 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 USP17L7P0C7H9 530 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 ATXN1LP0C7T5 689 aaKnown RBP8.88□□□□□ -0.99
CD44-232ENST00000531118 HAPLN1P10915 354 aaPredicted RBP8.88□□□□□ -0.99
CD44-232ENST00000531118 TCF3P15923 654 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 GABRG2P18507 467 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 RPS6KB1P23443 525 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 KIR2DL1P43626 348 aaPredicted RBP8.88□□□□□ -0.99
CD44-232ENST00000531118 PRR20EP86478 221 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 PRR20CP86479 221 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 PRR20DP86480 221 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 PRR20BP86481 221 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 PRR20AP86496 221 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 KDSRQ06136 332 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 SPAG1Q07617 926 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 MESP2Q0VG99 397 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 SEZ6Q53EL9 994 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 BLOC1S2Q6QNY1 142 aa8.88□□□□□ -0.99
CD44-232ENST00000531118 C12orf40Q86WS4 652 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms