RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 ZSWIM1Q9BR11 485 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 NUP85Q9BW27 656 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 DUSP16Q9BY84 665 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 MTIF3Q9H2K0 278 aaKnown RBP10.41□□□□□ -0.74
CTNND1-228ENST00000531007 SYNCQ9H7C4 482 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 ABCB6Q9NP58 842 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 PNPLA8Q9NP80 782 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 AAASQ9NRG9 546 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 TMEM51Q9NW97 253 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 SALL4Q9UJQ4 1053 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 CDC23Q9UJX2 597 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 AMFRQ9UKV5 643 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 HYOU1Q9Y4L1 999 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 SAR1BQ9Y6B6 198 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 CAPN6Q9Y6Q1 641 aa10.41□□□□□ -0.74
CTNND1-228ENST00000531007 GRID2IPA4D2P6 1211 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 SIGLEC16A6NMB1 481 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 XPO1O14980 1071 aaKnown RBP10.4□□□□□ -0.74
CTNND1-228ENST00000531007 URI1O94763 535 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-228ENST00000531007 FGBP02675 491 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 GALTP07902 379 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 PDGFRBP09619 1106 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 CSF2RAP15509 400 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 NPR3P17342 541 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 LAG3P18627 525 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 RRM1P23921 792 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 LMO2P25791 158 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 PPM1AP35813 382 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 WDR5P61964 334 aaKnown RBP10.4□□□□□ -0.74
CTNND1-228ENST00000531007 MAMLD1Q13495 774 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 PIGHQ14442 188 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-228ENST00000531007 RPS6KA1Q15418 735 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 NFE2Q16621 373 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-228ENST00000531007 GOLGA7BQ2TAP0 167 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 PRPF38BQ5VTL8 546 aaKnown RBP10.4□□□□□ -0.74
CTNND1-228ENST00000531007 DESI1Q6ICB0 168 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 DNAJC24Q6P3W2 148 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 MMS22LQ6ZRQ5 1243 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 PEX26Q7Z412 305 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 OSTM1Q86WC4 334 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 PASD1Q8IV76 773 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 UBL4BQ8N7F7 174 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 CEP112Q8N8E3 955 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 MNS1Q8NEH6 495 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 FEZF2Q8TBJ5 459 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 C2orf15Q8WU43 125 aaKnown RBP10.4□□□□□ -0.74
CTNND1-228ENST00000531007 KCTD13Q8WZ19 329 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 VWCEQ96DN2 955 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 ARHGEF26Q96DR7 871 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 MCRS1Q96EZ8 462 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 SMARCD1Q96GM5 515 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 FUBP3Q96I24 572 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTNND1-228ENST00000531007 PBKQ96KB5 322 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 PAAF1Q9BRP4 392 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 C11orf70Q9BRQ4 267 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 SELENOOQ9BVL4 669 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 PLVAPQ9BX97 442 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 IP6K2Q9UHH9 426 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 SNX12Q9UMY4 172 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 TFR2Q9UP52 801 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 MRFAP1Q9Y605 127 aa10.4□□□□□ -0.74
CTNND1-228ENST00000531007 BRCA2P51587 3418 aa10.4□□□□□ -0.75
CTNND1-228ENST00000531007 SCN5AQ14524 2016 aa10.4□□□□□ -0.75
CTNND1-228ENST00000531007 CCDC66A2RUB6 948 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 SART1O43290 800 aaKnown RBP10.39□□□□□ -0.75
CTNND1-228ENST00000531007 BUB1BO60566 1050 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-228ENST00000531007 FBXO21O94952 628 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 GLI1P08151 1106 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 CCNYL3P0C7X3 344 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 FAM200BP0CF97 657 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 KRT3P12035 628 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 IBSPP21815 317 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-228ENST00000531007 FGFR3P22607 806 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 BRCC3P46736 316 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 SLC11A1P49279 550 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 CKAP4Q07065 602 aaKnown RBP10.39□□□□□ -0.75
CTNND1-228ENST00000531007 MRPL58Q14197 206 aaKnown RBP10.39□□□□□ -0.75
CTNND1-228ENST00000531007 PTPRNQ16849 979 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 TCTN1Q2MV58 587 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 ZNF280DQ6N043 979 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 DCUN1D2Q6PH85 259 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.39□□□□□ -0.75
CTNND1-228ENST00000531007 ANKS3Q6ZW76 656 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 NIPA2Q8N8Q9 360 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 C12orf29Q8N999 325 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 SLC2A14Q8TDB8 520 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 HES6Q96HZ4 224 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 CEP295NLQ96MC4 621 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 SLC9A7Q96T83 725 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 TRIM62Q9BVG3 475 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 DPEP3Q9H4B8 488 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 CSNK1G1Q9HCP0 422 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 OSGEPQ9NPF4 335 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.39□□□□□ -0.75
CTNND1-228ENST00000531007 NME7Q9Y5B8 376 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 TET1Q8NFU7 2136 aa10.39□□□□□ -0.75
CTNND1-228ENST00000531007 COL4A6Q14031 1691 aa10.38□□□□□ -0.75
CTNND1-228ENST00000531007 CEP290O15078 2479 aa10.38□□□□□ -0.75
CTNND1-228ENST00000531007 TCRBV5S1A1TA0A578 114 aa10.38□□□□□ -0.75
CTNND1-228ENST00000531007 FAM187AA6NFU0 413 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms