RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CTAGE15A4D2H0 777 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 KCNK3O14649 394 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 GRM6O15303 877 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 CTAGE8P0CG41 777 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 LHX1P48742 406 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 GLUD2P49448 558 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 DSG1Q02413 1049 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 GPM6BQ13491 265 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 MAMLD1Q13495 774 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 PTPN20Q4JDL3 420 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 PPP1R26Q5T8A7 1209 aaPredicted RBP15.2■□□□□ 0.02
TTC39A-216ENST00000530004 CYP4A22Q5TCH4 519 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 KIAA1841Q6NSI8 718 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 CTAGE6Q86UF2 777 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 CTAGE4Q8IX94 777 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 HES6Q96HZ4 224 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 TRIM7Q9C029 511 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 DNAI2Q9GZS0 605 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 ZBP1Q9H171 429 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 FAM49BQ9NUQ9 324 aa15.2■□□□□ 0.02
TTC39A-216ENST00000530004 DDX43Q9NXZ2 648 aaKnown RBP15.2■□□□□ 0.02
TTC39A-216ENST00000530004 PDE2AO00408 941 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-216ENST00000530004 URODP06132 367 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 CTSAP10619 480 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 COMTP21964 271 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 DNAJB1P25685 340 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 GPD2P43304 727 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 CCDC181Q5TID7 509 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 KIAA0319Q5VV43 1072 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 ANKS3Q6ZW76 656 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 CRYBG2Q8N1P7 616 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 MSANTD4Q8NCY6 345 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 RIN2Q8WYP3 895 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-216ENST00000530004 PIK3R5Q8WYR1 880 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 GOLGA1Q92805 767 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 LPIN3Q9BQK8 851 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 RTP3Q9BQQ7 232 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 ZNF576Q9H609 170 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 EPOPA6NHQ4 379 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 DYNC1I1O14576 645 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 GJB6O95452 261 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 ERVFC1P60507 584 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 PDCLQ13371 301 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 CAMK1Q14012 370 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 ERCC6LQ2NKX8 1250 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 ARHGAP17Q68EM7 881 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 ZNF280DQ6N043 979 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 DNAJC24Q6P3W2 148 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 PRSS55Q6UWB4 352 aaPredicted RBP15.19■□□□□ 0.02
TTC39A-216ENST00000530004 GPR65Q8IYL9 337 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 THEM5Q8N1Q8 247 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 UBXN4Q92575 508 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 MS4A14Q96JA4 679 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 TNIP3Q96KP6 325 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 CPXM1Q96SM3 734 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 TCF25Q9BQ70 676 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 SYNCQ9H7C4 482 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 TLR9Q9NR96 1032 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 EHD2Q9NZN4 543 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 STRIP2Q9ULQ0 834 aa15.19■□□□□ 0.02
TTC39A-216ENST00000530004 NLRC5Q86WI3 1866 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 TRIOBPQ9H2D6 2365 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 TMEM265A0A087WTH1 108 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 H7C4K7 107 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 MYO1FO00160 1098 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 SOX1O00570 391 aaPredicted RBP15.18■□□□□ 0.02
TTC39A-216ENST00000530004 CES2O00748 559 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 C2CD2LO14523 706 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 DDX3YO15523 660 aaKnown RBP15.18■□□□□ 0.02
TTC39A-216ENST00000530004 SPOPO43791 374 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 TBC1D4O60343 1298 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 CCDC130P13994 396 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 PAFAH1B1P43034 410 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 CTXN3Q4LDR2 81 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 TEX35Q5T0J7 233 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 TMC7Q7Z402 723 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 TTC30AQ86WT1 665 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 FEZF2Q8TBJ5 459 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 AUTS2Q8WXX7 1259 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 C18orf8Q96DM3 657 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 PBKQ96KB5 322 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 ACBD6Q9BR61 282 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 MRPL17Q9NRX2 175 aaKnown RBP15.18■□□□□ 0.02
TTC39A-216ENST00000530004 SMARCAL1Q9NZC9 954 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 MTRRQ9UBK8 725 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 RNF14Q9UBS8 474 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 HESX1Q9UBX0 185 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 TJP2Q9UDY2 1190 aa15.18■□□□□ 0.02
TTC39A-216ENST00000530004 TCRBV5S1A1TA0A578 114 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 MIF4GDA9UHW6 222 aaKnown RBP15.17■□□□□ 0.02
TTC39A-216ENST00000530004 LILRB3O75022 631 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 ERBB2P04626 1255 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 ACAT1P24752 427 aaKnown RBP15.17■□□□□ 0.02
TTC39A-216ENST00000530004 PCSK1P29120 753 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 PSMC1P62191 440 aaKnown RBP15.17■□□□□ 0.02
TTC39A-216ENST00000530004 ELF2Q15723 593 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 PSMD5Q16401 504 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 CFAP221Q4G0U5 840 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 PKDCCQ504Y2 493 aa15.17■□□□□ 0.02
TTC39A-216ENST00000530004 RSRC2Q7L4I2 434 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms