RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 NCOR2Q9Y618 2525 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 A0A1B0GVL5 298 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 A8MXQ7 604 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 K7ESF4 209 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 ARSAP15289 507 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 PTPN1P18031 435 aaKnown RBP12.89□□□□□ -0.35
SORL1-208ENST00000529445 CNR2P34972 360 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 PPP3CCP48454 512 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 IFNAR2P48551 515 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 CASP4P49662 377 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 NOP14P78316 857 aaKnown RBP12.89□□□□□ -0.35
SORL1-208ENST00000529445 STK4Q13043 487 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 KMT5BQ4FZB7 885 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 TMEM196Q5HYL7 178 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 TDRD10Q5VZ19 366 aaKnown RBP12.89□□□□□ -0.35
SORL1-208ENST00000529445 B3GALNT2Q8NCR0 500 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 TTC16Q8NEE8 873 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 PARD3BQ8TEW8 1205 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 TMEM174Q8WUU8 243 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 OSCP1Q8WVF1 389 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 ZNF516Q92618 1163 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 CCDC47Q96A33 483 aaKnown RBP12.89□□□□□ -0.35
SORL1-208ENST00000529445 C8orf48Q96LL4 319 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 SLC22A12Q96S37 553 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 TTLL2Q9BWV7 592 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 VRTNQ9H8Y1 702 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 DUS2Q9NX74 493 aaKnown RBP12.89□□□□□ -0.35
SORL1-208ENST00000529445 TRPM5Q9NZQ8 1165 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 GCNT4Q9P109 453 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 ARHGAP26Q9UNA1 814 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 HPSEQ9Y251 543 aa12.89□□□□□ -0.35
SORL1-208ENST00000529445 SPTBN2O15020 2390 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 C2orf78A6NCI8 922 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 OTOL1A6NHN0 477 aaPredicted RBP12.88□□□□□ -0.35
SORL1-208ENST00000529445 LRRIQ3A6PVS8 624 aaPredicted RBP12.88□□□□□ -0.35
SORL1-208ENST00000529445 CHURC1-FNTBB4DL54 471 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 F8VP50 259 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 PDXKO00764 312 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 TRDMT1O14717 391 aaKnown RBP12.88□□□□□ -0.35
SORL1-208ENST00000529445 NR3C1P04150 777 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 TCF3P15923 654 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 HDCP19113 662 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 DRD1P21728 446 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 HOXA6P31267 233 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 SYKP43405 635 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 FNTBP49356 437 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 USP46P62068 366 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 CLDN10P78369 228 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 NCOA4Q13772 614 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 ZNF667Q5HYK9 610 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 LAIR1Q6GTX8 287 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 FSTL4Q6MZW2 842 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 PRR23BQ6ZRT6 265 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 LONP2Q86WA8 852 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 ARL14EPQ8N8R7 260 aaPredicted RBP12.88□□□□□ -0.35
SORL1-208ENST00000529445 PLEKHO2Q8TD55 490 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 SH3RF2Q8TEC5 729 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 RMDN1Q96DB5 314 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 CYP2S1Q96SQ9 504 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 KCTD10Q9H3F6 313 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 DPEP3Q9H4B8 488 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 ECT2Q9H8V3 914 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 DMAC2Q9NW81 257 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 NME7Q9Y5B8 376 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 ATP6V1DQ9Y5K8 247 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 WNT6Q9Y6F9 365 aa12.88□□□□□ -0.35
SORL1-208ENST00000529445 CALUO43852 315 aaPredicted RBP12.87□□□□□ -0.35
SORL1-208ENST00000529445 ATG13O75143 517 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 KIF20AO95235 890 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 RPN1P04843 607 aaKnown RBP12.87□□□□□ -0.35
SORL1-208ENST00000529445 P4HA1P13674 534 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 GJA4P35212 333 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 LMNB2Q03252 620 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 DMWDQ09019 674 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 SIM2Q14190 667 aaPredicted RBP12.87□□□□□ -0.35
SORL1-208ENST00000529445 PUM1Q14671 1186 aaKnown RBP eCLIP12.87□□□□□ -0.35
SORL1-208ENST00000529445 FBXO43Q4G163 708 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 HEATR6Q6AI08 1181 aaKnown RBP12.87□□□□□ -0.35
SORL1-208ENST00000529445 SCARA5Q6ZMJ2 495 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 CHFRQ96EP1 664 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 TNIP3Q96KP6 325 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 SLITRK1Q96PX8 696 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 P2RY13Q9BPV8 354 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 ZNF518BQ9C0D4 1074 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 USP18Q9UMW8 372 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 FRMD4BQ9Y2L6 1034 aa12.87□□□□□ -0.35
SORL1-208ENST00000529445 FAM237AA0A1B0GTK4 181 aa12.86□□□□□ -0.35
SORL1-208ENST00000529445 ZNF840PA6NDX5 716 aa12.86□□□□□ -0.35
SORL1-208ENST00000529445 RTN3O95197 1032 aaPredicted RBP12.86□□□□□ -0.35
SORL1-208ENST00000529445 NFATC1O95644 943 aa12.86□□□□□ -0.35
SORL1-208ENST00000529445 EGFP01133 1207 aa12.86□□□□□ -0.35
SORL1-208ENST00000529445 C4BPAP04003 597 aaKnown RBP12.86□□□□□ -0.35
SORL1-208ENST00000529445 SDHBP21912 280 aa12.86□□□□□ -0.35
SORL1-208ENST00000529445 RAP1GAPP47736 663 aa12.86□□□□□ -0.35
SORL1-208ENST00000529445 NDUFA8P51970 172 aa12.86□□□□□ -0.35
SORL1-208ENST00000529445 CACNA2D1P54289 1103 aa12.86□□□□□ -0.35
SORL1-208ENST00000529445 SLC7A9P82251 487 aa12.86□□□□□ -0.35
SORL1-208ENST00000529445 NR1H3Q13133 447 aa12.86□□□□□ -0.35
SORL1-208ENST00000529445 LPAL2Q16609 132 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms