RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 SOX9P48436 509 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 ENPEPQ07075 957 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 VEPH1Q14D04 833 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 CCDC183Q5T5S1 534 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 CYP4A22Q5TCH4 519 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 NAIF1Q69YI7 327 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 TTC30AQ86WT1 665 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 SPATA18Q8TC71 538 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 C2orf15Q8WU43 125 aaKnown RBP12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 TAF4BQ92750 862 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 TRPC7Q9HCX4 862 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 ABCB6Q9NP58 842 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCDC90B-211ENST00000529073 ANTXRLA6NF34 631 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 HEPACAM2A8MVW5 462 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 PIK3R2O00459 728 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 BRD2P25440 801 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 HOXC13P31276 330 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 TUFMP49411 452 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 SLC5A3P53794 718 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 TYRO3Q06418 890 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 TRIM68Q6AZZ1 485 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 FOXR2Q6PJQ5 311 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 C4orf50Q6ZRC1 276 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 CLEC20AQ6ZU45 233 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 ARID3BQ8IVW6 561 aaPredicted RBP12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 SIX5Q8N196 739 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 CRYBG2Q8N1P7 616 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 PPM1KQ8N3J5 372 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 ARL14EPQ8N8R7 260 aaPredicted RBP12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 METTL14Q9HCE5 456 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 OSER1Q9NX31 292 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 GMIPQ9P107 970 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 GCNT4Q9P109 453 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 MAFFQ9ULX9 164 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 NFE2L3Q9Y4A8 694 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 WDFY4Q6ZS81 3184 aa12.11□□□□□ -0.47
CCDC90B-211ENST00000529073 BECN2A8MW95 431 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 MDM4O15151 490 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 CYP26A1O43174 497 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 PPP1R2P41236 205 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 MTIF2P46199 727 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 TNK2Q07912 1038 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 KCNMA1Q12791 1236 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 TAF10Q12962 218 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 NCAPHQ15003 741 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 TAF12Q16514 161 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 GOLGA7BQ2TAP0 167 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 TMEM31Q5JXX7 168 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 RTL10Q7L3V2 364 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 AOPEPQ8N6M6 819 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 TMEM105Q8N8V8 129 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 EHBP1Q8NDI1 1231 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 UBA3Q8TBC4 463 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 USP13Q92995 863 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 FUCA2Q9BTY2 467 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 NT5C1AQ9BXI3 368 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 FOXQ1Q9C009 403 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 CYP3A43Q9HB55 503 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 NMUR1Q9HB89 426 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 FANCLQ9NW38 375 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 HSFX1Q9UBD0 423 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 NUDT5Q9UKK9 219 aa12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 MTF2Q9Y483 593 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-211ENST00000529073 OTOL1A6NHN0 477 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 GOLGA6L22H0YM25 854 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 ZNF197O14709 1029 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 EPHB6O15197 1021 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 STX10O60499 249 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 MBD3O95983 291 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 ABL1P00519 1130 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 CSH1P0DML2 217 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 CSH2P0DML3 217 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 CCDC192P0DO97 292 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 SRFP11831 508 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 ATP1A3P13637 1013 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 P4HA1P13674 534 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 ALADP13716 330 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 GDI1P31150 447 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 SIGLEC14Q08ET2 396 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 KCNJ12Q14500 433 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 TPD52L1Q16890 204 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 ANO6Q4KMQ2 910 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 CDKAL1Q5VV42 579 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 TRIM65Q6PJ69 517 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 TMEM270Q6UE05 265 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 DENND5BQ6ZUT9 1274 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 ITIH5Q86UX2 942 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 RBBP8NLQ8NC74 664 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 SMARCD2Q92925 531 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 CHFRQ96EP1 664 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 CYFIP2Q96F07 1278 aa12.09□□□□□ -0.47
CCDC90B-211ENST00000529073 TRMT2BQ96GJ1 504 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms