RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 SIM2Q14190 667 aaPredicted RBP12.33□□□□□ -0.44
SRPRA-203ENST00000528744 PUM1Q14671 1186 aaKnown RBP eCLIP12.33□□□□□ -0.44
SRPRA-203ENST00000528744 KMT5BQ4FZB7 885 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 TDRD10Q5VZ19 366 aaKnown RBP12.33□□□□□ -0.44
SRPRA-203ENST00000528744 VSTM1Q6UX27 236 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 STXBP4Q6ZWJ1 553 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 DGLUCYQ7Z3D6 616 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 LONP2Q86WA8 852 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 PARD3BQ8TEW8 1205 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 OSCP1Q8WVF1 389 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 WBP2Q969T9 261 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 KCNK16Q96T55 309 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 TTLL2Q9BWV7 592 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 KCTD10Q9H3F6 313 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 SMYD3Q9H7B4 428 aa12.33□□□□□ -0.44
SRPRA-203ENST00000528744 DUS2Q9NX74 493 aaKnown RBP12.33□□□□□ -0.44
SRPRA-203ENST00000528744 NXF1Q9UBU9 619 aaKnown RBP12.33□□□□□ -0.44
SRPRA-203ENST00000528744 DCDC2BA2VCK2 349 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 GDF9O60383 454 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 FAM163BP0C2L3 166 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 USP17L7P0C7H9 530 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 SLFN14P0C7P3 912 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 HOXA6P31267 233 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 CLDN10P78369 228 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 FOXK2Q01167 660 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 TAF10Q12962 218 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 C1orf228Q6PIY5 440 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 C4orf50Q6ZRC1 276 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 DENND5BQ6ZUT9 1274 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 HS2ST1Q7LGA3 356 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 WDR5BQ86VZ2 330 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 SYNPOQ8N3V7 929 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 FAM160A2Q8N612 972 aaPredicted RBP12.32□□□□□ -0.44
SRPRA-203ENST00000528744 C8orf48Q96LL4 319 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 FNBP1Q96RU3 617 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 KIF9Q9HAQ2 790 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 RXFP3Q9NSD7 469 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 FAM13BQ9NYF5 915 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 UXTQ9UBK9 157 aaPredicted RBP12.32□□□□□ -0.44
SRPRA-203ENST00000528744 CHORDC1Q9UHD1 332 aaPredicted RBP12.32□□□□□ -0.44
SRPRA-203ENST00000528744 ZMYM5Q9UJ78 669 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 USP18Q9UMW8 372 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 ARHGAP26Q9UNA1 814 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 HPSEQ9Y251 543 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 ATG2BQ96BY7 2078 aa12.32□□□□□ -0.44
SRPRA-203ENST00000528744 TRAV19A0A0A6YYK7 116 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 LEFTY2O00292 366 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 EXOC3O60645 756 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 BEST1O76090 585 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 STAU1O95793 577 aaKnown RBP12.31□□□□□ -0.44
SRPRA-203ENST00000528744 OLFM2O95897 454 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 CKMP06732 381 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 RETP07949 1114 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
SRPRA-203ENST00000528744 PFKFB1P16118 471 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 OPRD1P41143 372 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 SLC6A11P48066 632 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 SNRPFP62306 86 aaKnown RBP12.31□□□□□ -0.44
SRPRA-203ENST00000528744 GRSF1Q12849 480 aaKnown RBP eCLIP12.31□□□□□ -0.44
SRPRA-203ENST00000528744 ORC1Q13415 861 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 PDGFRLQ15198 375 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 CCDC6Q16204 474 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 LAIR1Q6GTX8 287 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 SPOPLQ6IQ16 392 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 HSCBQ8IWL3 235 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 ADGRG2Q8IZP9 1017 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 ZMIZ2Q8NF64 920 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 SCAMP5Q8TAC9 235 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 P2RY13Q9BPV8 354 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 SNX25Q9H3E2 840 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 MAGEF1Q9HAY2 307 aa12.31□□□□□ -0.44
SRPRA-203ENST00000528744 A8MXQ7 604 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 K7EQS6 105 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 TNFRSF10BO14763 440 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 DCLK1O15075 740 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 AXIN1O15169 862 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 OAS1P00973 400 aaKnown RBP12.3□□□□□ -0.44
SRPRA-203ENST00000528744 HNRNPLP14866 589 aaKnown RBP eCLIP12.3□□□□□ -0.44
SRPRA-203ENST00000528744 TCF3P15923 654 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 CMA1P23946 247 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 NOP14P78316 857 aaKnown RBP12.3□□□□□ -0.44
SRPRA-203ENST00000528744 SLC7A9P82251 487 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 TRPC3Q13507 836 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 PPP2R5DQ14738 602 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 EMC10Q5UCC4 262 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
SRPRA-203ENST00000528744 KBTBD6Q86V97 674 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 B3GALNT2Q8NCR0 500 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 CD101Q93033 1021 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 HHIPQ96QV1 700 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 SMOC1Q9H4F8 434 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 VRTNQ9H8Y1 702 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.3□□□□□ -0.446e-11■■■■■ 104.8
SRPRA-203ENST00000528744 SEMA4GQ9NTN9 838 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 SMPD4Q9NXE4 827 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 IL37Q9NZH6 218 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 TRPM5Q9NZQ8 1165 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 HMGXB4Q9UGU5 601 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 GMEB2Q9UKD1 530 aa12.3□□□□□ -0.44
SRPRA-203ENST00000528744 R3HCC1Q9Y3T6 440 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms