RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 FBXO44Q9H4M3 255 aa13.85□□□□□ -0.19
CNKSR1-211ENST00000528001 ZNF334Q9HCZ1 680 aaPredicted RBP13.85□□□□□ -0.19
CNKSR1-211ENST00000528001 CD320Q9NPF0 282 aa13.85□□□□□ -0.19
CNKSR1-211ENST00000528001 KRT82Q9NSB4 513 aa13.85□□□□□ -0.19
CNKSR1-211ENST00000528001 FAM49BQ9NUQ9 324 aa13.85□□□□□ -0.19
CNKSR1-211ENST00000528001 TMEM30AQ9NV96 361 aa13.85□□□□□ -0.19
CNKSR1-211ENST00000528001 TAB2Q9NYJ8 693 aa13.85□□□□□ -0.19
CNKSR1-211ENST00000528001 PCDHB4Q9Y5E5 795 aa13.85□□□□□ -0.19
CNKSR1-211ENST00000528001 MUC3AQ02505 3323 aa13.85□□□□□ -0.19
CNKSR1-211ENST00000528001 TCF20Q9UGU0 1960 aaKnown RBP13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 TNFRSF10AO00220 468 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 O00370 1275 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 MYL4P12829 197 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 CEBPBP17676 345 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 GPR15P49685 360 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 CACNA2D1P54289 1103 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 BCAT1P54687 386 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 ORC1Q13415 861 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 HTR4Q13639 388 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 PTPN21Q16825 1174 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 ZNF394Q53GI3 561 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 SNX30Q5VWJ9 437 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 LCLAT1Q6UWP7 414 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 CLEC20AQ6ZU45 233 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 TMEM150AQ86TG1 271 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 UBALD2Q8IYN6 164 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 RBBP8NLQ8NC74 664 aaPredicted RBP13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 ZMIZ2Q8NF64 920 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 KAT5Q92993 513 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 TCEAL4Q96EI5 215 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 NECAB3Q96P71 396 aaPredicted RBP13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 SLITRK1Q96PX8 696 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 NAA15Q9BXJ9 866 aaKnown RBP13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 VPS16Q9H269 839 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 TASP1Q9H6P5 420 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 CBX8Q9HC52 389 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 OBP2AQ9NY56 170 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 SORCS3Q9UPU3 1222 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 TTC28Q96AY4 2481 aa13.84□□□□□ -0.19
CNKSR1-211ENST00000528001 A0A1W2PRU2 124 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 HHLA1C9JL84 531 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 PES1O00541 588 aaKnown RBP13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 ECI2O75521 394 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 SETSIPP0DME0 302 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 ALADP13716 330 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 UCHL3P15374 230 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 YWHAQP27348 245 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 SLC5A3P53794 718 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 BPIFB4P59827 614 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 ZNF445P59923 1031 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 TEAD2Q15562 447 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 FILIP1LQ4L180 1135 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 PKDCCQ504Y2 493 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 KIAA1958Q8N8K9 716 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 MRPS31Q92665 395 aaKnown RBP13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 SMARCD2Q92925 531 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 ELSPBP1Q96BH3 223 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 ASB16Q96NS5 453 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 KCNK16Q96T55 309 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 STK33Q9BYT3 514 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 ATXN3LQ9H3M9 355 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 KCNK12Q9HB15 430 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 HESX1Q9UBX0 185 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 DNAJC12Q9UKB3 198 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 TSPAN16Q9UKR8 245 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 SIK3Q9Y2K2 1263 aa13.83□□□□□ -0.2
CNKSR1-211ENST00000528001 A0A1B0GTH6 734 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 A0A1W2PQC6 194 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 PI4K2BG5E9Z4 385 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 RNF225M0QZC1 329 aaPredicted RBP13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 XPO1O14980 1071 aaKnown RBP13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 MED7O43513 233 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 TADA3O75528 432 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 ATP1A3P13637 1013 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 CD19P15391 556 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 TCF3P15923 654 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 ADORA2BP29275 332 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 PLA2G4AP47712 749 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 TUBP50607 506 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 MAP3K7CLP57077 242 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 BST2Q10589 180 aaKnown RBP13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 TDGQ13569 410 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 MTMR3Q13615 1198 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 ZNF268Q14587 947 aaPredicted RBP13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 RAB41Q5JT25 222 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 SDHAF4Q5VUM1 108 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 MON1AQ86VX9 555 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 FAM71AQ8IYT1 594 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 SCML4Q8N228 414 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 ZNF276Q8N554 614 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 GPR152Q8TDT2 470 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 KCTD13Q8WZ19 329 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 KIF9Q9HAQ2 790 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 RTN4Q9NQC3 1192 aaKnown RBP13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 TRPM5Q9NZQ8 1165 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 LIMD1Q9UGP4 676 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 MAGED2Q9UNF1 606 aaPredicted RBP13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 SCML2Q9UQR0 700 aa13.82□□□□□ -0.2
CNKSR1-211ENST00000528001 USP3Q9Y6I4 520 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms