RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 RAB23Q9ULC3 237 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 ARHGAP26Q9UNA1 814 aa15.13■□□□□ 0.01
CAPN1-212ENST00000527887 SMG5Q9UPR3 1016 aaKnown RBP15.13■□□□□ 0.01
CAPN1-212ENST00000527887 A0A1W2PQ27 194 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 A0A1W2PQ64 194 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 A0A1W2PQD8 194 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 C4BPAP04003 597 aaKnown RBP15.12■□□□□ 0.01
CAPN1-212ENST00000527887 PTMSP20962 102 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 DRD1P21728 446 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 SATB1Q01826 763 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 ENPEPQ07075 957 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 USP4Q13107 963 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 BIRC3Q13489 604 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 NCOA4Q13772 614 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 ZNF77Q15935 545 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 NFIL3Q16649 462 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 SGSM1Q2NKQ1 1148 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 ZNF699Q32M78 642 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 ZNF667Q5HYK9 610 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 MDH1BQ5I0G3 518 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 TDRD10Q5VZ19 366 aaKnown RBP15.12■□□□□ 0.01
CAPN1-212ENST00000527887 LONP2Q86WA8 852 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 KIAA2013Q8IYS2 634 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 B3GALNT2Q8NCR0 500 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 GBP4Q96PP9 640 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 EBF3Q9H4W6 596 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 RBM12Q9NTZ6 932 aaKnown RBP15.12■□□□□ 0.01
CAPN1-212ENST00000527887 DUS2Q9NX74 493 aaKnown RBP15.12■□□□□ 0.01
CAPN1-212ENST00000527887 NXF1Q9UBU9 619 aaKnown RBP15.12■□□□□ 0.01
CAPN1-212ENST00000527887 TRAF3IP3Q9Y228 551 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 FRMD4BQ9Y2L6 1034 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 ATP8B3O60423 1300 aa15.12■□□□□ 0.01
CAPN1-212ENST00000527887 TCHHQ07283 1943 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 CCDC163A0A0D9SF12 145 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 LRRIQ3A6PVS8 624 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-212ENST00000527887 F8VP50 259 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 K7ESF4 209 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 RHOBTB3O94955 611 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 NR3C1P04150 777 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 IFNAR2P48551 515 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 CCDC142Q17RM4 750 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 ZACNQ401N2 412 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 ARL14EPQ8N8R7 260 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-212ENST00000527887 STKLD1Q8NE28 680 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 OVCA2Q8WZ82 227 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 SLITRK1Q96PX8 696 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 CYP2S1Q96SQ9 504 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 ECT2Q9H8V3 914 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 COMMD8Q9NX08 183 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 GMEB2Q9UKD1 530 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 ZDHHC9Q9Y397 364 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 NUP210Q8TEM1 1887 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-212ENST00000527887 GPR179Q6PRD1 2367 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 DMXL1Q9Y485 3027 aa15.11■□□□□ 0.01
CAPN1-212ENST00000527887 FANCMQ8IYD8 2048 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 PATJQ8NI35 1801 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 ZNF840PA6NDX5 716 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 CHURC1-FNTBB4DL54 471 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 LRP3O75074 770 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 RTN3O95197 1032 aaPredicted RBP15.1■□□□□ 0.01
CAPN1-212ENST00000527887 TRIM21P19474 475 aaKnown RBP15.1■□□□□ 0.01
CAPN1-212ENST00000527887 RPL13P26373 211 aaKnown RBP15.1■□□□□ 0.01
CAPN1-212ENST00000527887 GJA4P35212 333 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 CASP4P49662 377 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 NDUFA8P51970 172 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 SLC7A9P82251 487 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 WDR44Q5JSH3 913 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 TRIM68Q6AZZ1 485 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 LAIR1Q6GTX8 287 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 Q6ZS52 159 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 UNC93AQ86WB7 457 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 NUP93Q8N1F7 819 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 PDZD8Q8NEN9 1154 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 PLEKHO2Q8TD55 490 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 SH3RF2Q8TEC5 729 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 SLC22A12Q96S37 553 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 NME7Q9Y5B8 376 aa15.1■□□□□ 0.01
CAPN1-212ENST00000527887 TICRRQ7Z2Z1 1910 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 C2orf78A6NCI8 922 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 OTOL1A6NHN0 477 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-212ENST00000527887 PRR5-ARHGAP8B1AHC4 643 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 SLC9A3R1O14745 358 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-212ENST00000527887 NFATC1O95644 943 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 ARSAP15289 507 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 GALK1P51570 392 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 ARHGAP8P85298 464 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 DPYDQ12882 1025 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 PUM1Q14671 1186 aaKnown RBP eCLIP15.09■□□□□ 0.01
CAPN1-212ENST00000527887 EML3Q32P44 896 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 FSTL4Q6MZW2 842 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 INTS8Q75QN2 995 aaKnown RBP15.09■□□□□ 0.01
CAPN1-212ENST00000527887 SV2AQ7L0J3 742 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 WDR5BQ86VZ2 330 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 DDX42Q86XP3 938 aaKnown RBP eCLIP15.09■□□□□ 0.01
CAPN1-212ENST00000527887 GUF1Q8N442 669 aaKnown RBP15.09■□□□□ 0.01
CAPN1-212ENST00000527887 DCLK2Q8N568 766 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 CAMKK1Q8N5S9 505 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 RIN3Q8TB24 985 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 P2RY13Q9BPV8 354 aa15.09■□□□□ 0.01
CAPN1-212ENST00000527887 B3GNT5Q9BYG0 378 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms