RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 PNKPQ96T60 521 aa13.2□□□□□ -0.3
SRPRA-202ENST00000527817 ST6GALNAC4Q9H4F1 302 aa13.2□□□□□ -0.3
SRPRA-202ENST00000527817 DDX43Q9NXZ2 648 aaKnown RBP13.2□□□□□ -0.3
SRPRA-202ENST00000527817 L1RE1Q9UN81 338 aa13.2□□□□□ -0.3
SRPRA-202ENST00000527817 IGSF10Q6WRI0 2623 aa13.2□□□□□ -0.3
SRPRA-202ENST00000527817 ACACAQ13085 2346 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 ADAMTS20P59510 1910 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 ASXL3Q9C0F0 2248 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 SGK1O00141 431 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 LEFTY2O00292 366 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 SLC9A3R1O14745 358 aaPredicted RBP13.19□□□□□ -0.3
SRPRA-202ENST00000527817 GABRDO14764 452 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 KLF8O95600 359 aaPredicted RBP13.19□□□□□ -0.3
SRPRA-202ENST00000527817 SERPINF2P08697 491 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 TIE1P35590 1138 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 MAGEA11P43364 429 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 SLC6A11P48066 632 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 LHX1P48742 406 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 ATXN3P54252 364 aaPredicted RBP13.19□□□□□ -0.3
SRPRA-202ENST00000527817 GFPT1Q06210 699 aaPredicted RBP13.19□□□□□ -0.3
SRPRA-202ENST00000527817 ZNF423Q2M1K9 1284 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 EOGTQ5NDL2 527 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 LYSMD4Q5XG99 296 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 ARL6IP4Q66PJ3 421 aaKnown RBP13.19□□□□□ -0.3
SRPRA-202ENST00000527817 FAM171BQ6P995 826 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 RAB44Q7Z6P3 723 aaPredicted RBP13.19□□□□□ -0.3
SRPRA-202ENST00000527817 SPATA2LQ8IUW3 424 aaPredicted RBP13.19□□□□□ -0.3
SRPRA-202ENST00000527817 SCN4BQ8IWT1 228 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
SRPRA-202ENST00000527817 SPATA17Q96L03 361 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 ZSCAN31Q96LW9 406 aaPredicted RBP13.19□□□□□ -0.3
SRPRA-202ENST00000527817 CEP295NLQ96MC4 621 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 CAPN10Q9HC96 672 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 GDAP2Q9NXN4 497 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 AGAP1Q9UPQ3 857 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 GPSM3Q9Y4H4 160 aa13.19□□□□□ -0.3
SRPRA-202ENST00000527817 GCN1Q92616 2671 aaKnown RBP13.19□□□□□ -0.3
SRPRA-202ENST00000527817 LOC400499M0QZD8 3231 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 TNRC6BQ9UPQ9 1833 aaKnown RBP13.18□□□□□ -0.3
SRPRA-202ENST00000527817 PLXND1Q9Y4D7 1925 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 MYOFQ9NZM1 2061 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 VWA3AA6NCI4 1184 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 TISP43B9A030 160 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 OPHN1O60890 802 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 KAT7O95251 611 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 APODP05090 189 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 CYP17A1P05093 508 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 ITPKAP23677 461 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 ACAT1P24752 427 aaKnown RBP13.18□□□□□ -0.3
SRPRA-202ENST00000527817 PCSK1P29120 753 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 POLR2BP30876 1174 aaKnown RBP13.18□□□□□ -0.3
SRPRA-202ENST00000527817 GRIA2P42262 883 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 KIR2DL1P43626 348 aaPredicted RBP13.18□□□□□ -0.3
SRPRA-202ENST00000527817 FAM193AP78312 1265 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 SLC7A9P82251 487 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 DHCR24Q15392 516 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 SOWAHCQ53LP3 525 aaPredicted RBP13.18□□□□□ -0.3
SRPRA-202ENST00000527817 RILPL1Q5EBL4 403 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 EMC10Q5UCC4 262 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 RHBDF2Q6PJF5 856 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 ARMCX6Q7L4S7 300 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 RABEPKQ7Z6M1 372 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 LRRC52Q8N7C0 313 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 AK8Q96MA6 479 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 TRPM5Q9NZQ8 1165 aa13.18□□□□□ -0.3
SRPRA-202ENST00000527817 BCCIPQ9P287 314 aaKnown RBP eCLIP13.18□□□□□ -0.3
SRPRA-202ENST00000527817 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
SRPRA-202ENST00000527817 ARHGAP33O14559 1287 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 AP5Z1O43299 807 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 ADAM23O75077 832 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 CFIP05156 583 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 CD59P13987 128 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 ADSSP30520 456 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 PPP3CCP48454 512 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 MESP2Q0VG99 397 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 SLC14A1Q13336 389 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 DHX8Q14562 1220 aaKnown RBP13.17□□□□□ -0.3
SRPRA-202ENST00000527817 VSTM1Q6UX27 236 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 SLC36A4Q6YBV0 504 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 C4orf50Q6ZRC1 276 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 DPH6Q7L8W6 267 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 FILIP1Q7Z7B0 1213 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 OSTM1Q86WC4 334 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 SFTPA1Q8IWL2 248 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 CSGALNACT2Q8N6G5 542 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 TOP6BLQ8N6T0 577 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 C1orf127Q8N9H9 656 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 CXorf38Q8TB03 319 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 KCNV2Q8TDN2 545 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 HMGB4Q8WW32 186 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 CALML4Q96GE6 196 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 RNF38Q9H0F5 515 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 BLOC1S4Q9NUP1 217 aa13.17□□□□□ -0.3
SRPRA-202ENST00000527817 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
SRPRA-202ENST00000527817 MAGEC2Q9UBF1 373 aaPredicted RBP13.17□□□□□ -0.3
SRPRA-202ENST00000527817 SETXQ7Z333 2677 aaKnown RBP13.17□□□□□ -0.3
SRPRA-202ENST00000527817 FLNBO75369 2602 aaKnown RBP13.16□□□□□ -0.3
SRPRA-202ENST00000527817 ADAMTS9Q9P2N4 1935 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms