RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 DNAL1Q4LDG9 190 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 TIGD2Q4W5G0 525 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 TAF1BQ53T94 588 aaPredicted RBP6.07□□□□□ -1.44
CD44-225ENST00000527326 NAALADL2Q58DX5 795 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 RILPL1Q5EBL4 403 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 C6orf10Q5SRN2 563 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 CCNJQ5T5M9 372 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 ZNF658Q5TYW1 1059 aaPredicted RBP6.07□□□□□ -1.44
CD44-225ENST00000527326 SLX4IPQ5VYV7 408 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 RRAGBQ5VZM2 374 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 EGFLAMQ63HQ2 1017 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 FAM91A1Q658Y4 838 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 PPP4R4Q6NUP7 873 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 ELMSAN1Q6PJG2 1045 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 VSTM1Q6UX27 236 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 IDO2Q6ZQW0 420 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 TRMT10CQ7L0Y3 403 aaKnown RBP6.07□□□□□ -1.44
CD44-225ENST00000527326 GPR141Q7Z602 305 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 DHDDSQ86SQ9 333 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 DCP2Q8IU60 420 aaKnown RBP6.07□□□□□ -1.44
CD44-225ENST00000527326 RASGEF1CQ8N431 466 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 METTL25Q8N6Q8 603 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 PAF1Q8N7H5 531 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 CCDC89Q8N998 374 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 ICA1LQ8NDH6 482 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 CATSPER1Q8NEC5 780 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 RIN3Q8TB24 985 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 BRSK1Q8TDC3 778 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 FAM172AQ8WUF8 416 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 C10orf82Q8WW14 230 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 WASF1Q92558 559 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 JADE3Q92613 823 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 TNFRSF25Q93038 417 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 TRIM63Q969Q1 353 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 PTCD3Q96EY7 689 aaKnown RBP6.07□□□□□ -1.44
CD44-225ENST00000527326 GIMAP5Q96F15 307 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 PAGE5Q96GU1 130 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 FBXL18Q96ME1 805 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 C7orf26Q96N11 449 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 ZNF641Q96N77 438 aaPredicted RBP6.07□□□□□ -1.44
CD44-225ENST00000527326 ASB16Q96NS5 453 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 ERGIC2Q96RQ1 377 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 CIB1Q99828 191 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 SENP7Q9BQF6 1050 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 ALG1Q9BT22 464 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 DSCC1Q9BVC3 393 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 USP44Q9H0E7 712 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 SERHL2Q9H4I8 314 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 IGFLR1Q9H665 355 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 EHMT1Q9H9B1 1298 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 XAB2Q9HCS7 855 aaKnown RBP6.07□□□□□ -1.44
CD44-225ENST00000527326 UBN1Q9NPG3 1134 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 OLFML3Q9NRN5 406 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 VPS45Q9NRW7 570 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 GMIPQ9P107 970 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 HMGXB4Q9UGU5 601 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 MOSPD1Q9UJG1 213 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 DCTN4Q9UJW0 460 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 CDH7Q9ULB5 785 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 VANGL2Q9ULK5 521 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 RAB26Q9ULW5 256 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 CFL2Q9Y281 166 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 PCDHGB3Q9Y5G1 929 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 SRPRBQ9Y5M8 271 aaKnown RBP6.07□□□□□ -1.44
CD44-225ENST00000527326 SLC12A7Q9Y666 1083 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 PPLO60437 1756 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 CACNA1FO60840 1977 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 PHLPP1O60346 1717 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 ROBO1Q9Y6N7 1651 aa6.07□□□□□ -1.44
CD44-225ENST00000527326 ADGRA3Q8IWK6 1321 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 NFAT5O94916 1531 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 C4AP0C0L4 1744 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 C4BP0C0L5 1744 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 NPHP3-ACAD11A0A0J9YXS1 232 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 FAM172BPA6NC97 362 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 KRIT1O00522 736 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 CASQ2O14958 399 aaPredicted RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 DNAJC6O75061 913 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 GPC4O75487 556 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 GMNNO75496 209 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 TCEA3O75764 348 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 DDHD2O94830 711 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 CBX6O95503 412 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ZBTB11O95625 1053 aaPredicted RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 BMP15O95972 392 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 APBA3O96018 575 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 EGFRP00533 1210 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ALBP02768 609 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 S100A6P06703 90 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 C8BP07358 591 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ALAS1P13196 640 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 TCF3P15923 654 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 ZNF23P17027 643 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 TAC1P20366 129 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 MUTP22033 750 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 CFL1P23528 166 aaKnown RBP6.06□□□□□ -1.44
CD44-225ENST00000527326 PKLRP30613 574 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 CSTF2P33240 577 aaKnown RBP eCLIP6.06□□□□□ -1.44
CD44-225ENST00000527326 IL13P35225 146 aa6.06□□□□□ -1.44
CD44-225ENST00000527326 NUDT1P36639 197 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms