RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 NDC80O14777 642 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 GNAT1P11488 350 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 ERFP50548 548 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 PSMD6Q15008 389 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 OASLQ15646 514 aaKnown RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 SMTNL2Q2TAL5 461 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 AP1ARQ63HQ0 302 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 SAMD3Q8N6K7 520 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 REPS2Q8NFH8 660 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 SH3TC2Q8TF17 1288 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 PTPRN2Q92932 1015 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 ZNF333Q96JL9 665 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 ZBTB45Q96K62 511 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 PTPN18Q99952 460 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 PDCD2LQ9BRP1 358 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 POLR3FQ9H1D9 316 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 VPS11Q9H270 941 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 TLE6Q9H808 572 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 HOXC10Q9NYD6 342 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 RBAKQ9NYW8 714 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 KANSL3Q9P2N6 904 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 BTBD19C9JJ37 291 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 PDHXO00330 501 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 VNN1O95497 513 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 ITGAVP06756 1048 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 CPA2P48052 419 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 BASP1P80723 227 aaKnown RBP13.08□□□□□ -0.32
CAPN1-208ENST00000527323 OTUD4Q01804 1114 aaKnown RBP13.08□□□□□ -0.32
CAPN1-208ENST00000527323 SP2Q02086 613 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 CTC1Q2NKJ3 1217 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 ACSBG2Q5FVE4 666 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 SYCP2LQ5T4T6 812 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 ADGRD1Q6QNK2 874 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 PDIK1LQ8N165 341 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 ACTL9Q8TC94 416 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 COPS5Q92905 334 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 PRR11Q96HE9 360 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-208ENST00000527323 FAM111AQ96PZ2 611 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 C17orf75Q9HAS0 396 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 SCOCQ9UIL1 159 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 NUB1Q9Y5A7 615 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 TM9SF1O15321 606 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 CST8O60676 142 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 PLA2G6O60733 806 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 RGS20O76081 388 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 ZNF157P51786 506 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-208ENST00000527323 MTERF2Q49AM1 385 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 SEZ6Q53EL9 994 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 BRI3BPQ8WY22 251 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 ALKBH8Q96BT7 664 aaKnown RBP13.08□□□□□ -0.32
CAPN1-208ENST00000527323 IMPG2Q9BZV3 1241 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 IQCGQ9H095 443 aaKnown RBP13.08□□□□□ -0.32
CAPN1-208ENST00000527323 SPATC1LQ9H0A9 340 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 PXMP2Q9NR77 195 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 PAPOLBQ9NRJ5 636 aaKnown RBP13.08□□□□□ -0.32
CAPN1-208ENST00000527323 ABT1Q9ULW3 272 aaKnown RBP13.08□□□□□ -0.32
CAPN1-208ENST00000527323 CHMP2BQ9UQN3 213 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 MTO1Q9Y2Z2 717 aaKnown RBP13.08□□□□□ -0.32
CAPN1-208ENST00000527323 DOCK5Q9H7D0 1870 aa13.08□□□□□ -0.32
CAPN1-208ENST00000527323 PTPRJQ12913 1337 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 ZNF862O60290 1169 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 CALB1P05937 261 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 BGNP21810 368 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 MMP8P22894 467 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 GDF10P55107 478 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 MCCD1P59942 119 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 OGDHQ02218 1023 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 SLC34A1Q06495 639 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 KCNT1Q5JUK3 1230 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 SPDYAQ5MJ70 313 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 CYP4A22Q5TCH4 519 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 RINLQ6ZS11 566 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 BANPQ8N9N5 519 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 MCPH1Q8NEM0 835 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 CPT1BQ92523 772 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 ATP6V0A1Q93050 837 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 NKD2Q969F2 451 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 SSU72Q9NP77 194 aaKnown RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 ARMCX1Q9P291 453 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 MCM3APO60318 1980 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 DGAT1O75907 488 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 SP100P23497 879 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 TBXAS1P24557 533 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 PGM1P36871 562 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 CDKN2BP42772 138 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 PAPOLAP51003 745 aaKnown RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 BIRC2Q13490 618 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 IRGCQ6NXR0 463 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 LRRC74BQ6ZQY2 392 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 TAS1R3Q7RTX0 852 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 ACSS3Q9H6R3 686 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 SYNCQ9H7C4 482 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 PDGFCQ9NRA1 345 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 DDX56Q9NY93 547 aaKnown RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 TAS2R1Q9NYW7 299 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 XPO7Q9UIA9 1087 aaKnown RBP13.07□□□□□ -0.32
CAPN1-208ENST00000527323 PPP2R3BQ9Y5P8 575 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 LRRIQ4A6NIV6 560 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 PSMG1O95456 288 aa13.07□□□□□ -0.32
CAPN1-208ENST00000527323 INHBAP08476 426 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms