RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CXCL16Q9H2A7 254 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 KLC4Q9NSK0 619 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 DPP3Q9NY33 737 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 COL1A2P08123 1366 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
USH1C-205ENST00000527020 APOC4-APOC2K7ER74 178 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 PIK3R2O00459 728 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 NDC80O14777 642 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 SPAG7O75391 227 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 APOC2P02655 101 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 GSTA1P08263 222 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 PCK1P35558 622 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 ADCYAP1R1P41586 468 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 ZNF143P52747 638 aaPredicted RBP18.42■□□□□ 0.54
USH1C-205ENST00000527020 NR1H3Q13133 447 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 MMRN1Q13201 1228 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 ZKSCAN8Q15776 578 aaPredicted RBP18.42■□□□□ 0.54
USH1C-205ENST00000527020 PPP1R21Q6ZMI0 780 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 PRKAG3Q9UGI9 489 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 ITGA11Q9UKX5 1188 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 ZMYND8Q9ULU4 1186 aaPredicted RBP18.42■□□□□ 0.54
USH1C-205ENST00000527020 C2CD2Q9Y426 696 aa18.42■□□□□ 0.54
USH1C-205ENST00000527020 C2CD4BA6NLJ0 364 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 PRPF4O43172 522 aaKnown RBP eCLIP18.41■□□□□ 0.54
USH1C-205ENST00000527020 RNF8O76064 485 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 TMEM63AO94886 807 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 ASMTLO95671 621 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 STAU1O95793 577 aaKnown RBP18.41■□□□□ 0.54
USH1C-205ENST00000527020 P4HA1P13674 534 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 ADORA2AP29274 412 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 NRLP54845 237 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 EFHC2Q5JST6 749 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 MARCH8Q5T0T0 291 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 FAM183BPQ6ZVS7 135 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 DPH6Q7L8W6 267 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 EMID1Q96A84 441 aaPredicted RBP18.41■□□□□ 0.54
USH1C-205ENST00000527020 PHACTR1Q9C0D0 580 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 TRABDQ9H4I3 376 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 VTA1Q9NP79 307 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 UBN1Q9NPG3 1134 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 RABGEF1Q9UJ41 708 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 A0A1B0GUA9 196 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.41■□□□□ 0.54
USH1C-205ENST00000527020 E5RJQ4 531 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 E7ESA3 106 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 EIF3EP60228 445 aaKnown RBP18.41■□□□□ 0.54
USH1C-205ENST00000527020 RBP5P82980 135 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 MKRN3Q13064 507 aaKnown RBP18.41■□□□□ 0.54
USH1C-205ENST00000527020 RASA2Q15283 850 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 KYAT1Q16773 422 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 LCLAT1Q6UWP7 414 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 SPATA21Q7Z572 469 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 FAM71DQ8N9W8 422 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 NLRP7Q8WX94 980 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 RSAD2Q8WXG1 361 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 SGSM3Q96HU1 749 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 ACAP3Q96P50 834 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 CALN1Q9BXU9 219 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 ASNSD1Q9NWL6 643 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 GGT7Q9UJ14 662 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 TSPAN16Q9UKR8 245 aa18.41■□□□□ 0.54
USH1C-205ENST00000527020 SUN1O94901 812 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 GPD1P21695 349 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 SSTR1P30872 391 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 EFTUD2Q15029 972 aaKnown RBP eCLIP18.4■□□□□ 0.54
USH1C-205ENST00000527020 C15orf59Q2T9L4 293 aaPredicted RBP18.4■□□□□ 0.54
USH1C-205ENST00000527020 LDLRAD1Q5T700 205 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 ICE2Q659A1 982 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 CYB5D1Q6P9G0 228 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 NPNTQ6UXI9 565 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 TAB3Q8N5C8 712 aaPredicted RBP18.4■□□□□ 0.54
USH1C-205ENST00000527020 C12orf29Q8N999 325 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 RXFP2Q8WXD0 754 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 CNPY3Q9BT09 278 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 SLC24A2Q9UI40 661 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 GRID1Q9ULK0 1009 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 UBOX5O94941 541 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 SLC18A1P54219 525 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 ARL4CP56559 192 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 SNAPC2Q13487 334 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 GALNTL6Q49A17 601 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 FAM133BQ5BKY9 247 aaKnown RBP18.4■□□□□ 0.54
USH1C-205ENST00000527020 GPRC5AQ8NFJ5 357 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 RSAD1Q9HA92 442 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 GBA2Q9HCG7 927 aaPredicted RBP18.4■□□□□ 0.54
USH1C-205ENST00000527020 NME7Q9Y5B8 376 aa18.4■□□□□ 0.54
USH1C-205ENST00000527020 PCNTO95613 3336 aa18.39■□□□□ 0.53
USH1C-205ENST00000527020 A0A1W2PPM1 405 aa18.39■□□□□ 0.53
USH1C-205ENST00000527020 H3BRB1 525 aa18.39■□□□□ 0.53
USH1C-205ENST00000527020 SNAI1O95863 264 aaPredicted RBP18.39■□□□□ 0.53
USH1C-205ENST00000527020 RBP3P10745 1247 aa18.39■□□□□ 0.53
USH1C-205ENST00000527020 MTFR1Q15390 333 aa18.39■□□□□ 0.53
USH1C-205ENST00000527020 C4orf33Q8N1A6 199 aa18.39■□□□□ 0.53
USH1C-205ENST00000527020 SPATA18Q8TC71 538 aa18.39■□□□□ 0.53
USH1C-205ENST00000527020 MRRFQ96E11 262 aaKnown RBP18.39■□□□□ 0.53
USH1C-205ENST00000527020 KIF12Q96FN5 646 aa18.39■□□□□ 0.53
USH1C-205ENST00000527020 TUT1Q9H6E5 874 aaKnown RBP18.39■□□□□ 0.53
USH1C-205ENST00000527020 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.39■□□□□ 0.53
USH1C-205ENST00000527020 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.39■□□□□ 0.53
USH1C-205ENST00000527020 PSMC3IPQ9P2W1 217 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms