RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 PPM1LQ5SGD2 360 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 TAF3Q5VWG9 929 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 LLGL2Q6P1M3 1020 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 DENND1BQ6P3S1 775 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 TRIM72Q6ZMU5 477 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 ZNF571Q7Z3V5 609 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-205ENST00000526954 SCN4BQ8IWT1 228 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 CMASQ8NFW8 434 aaPredicted RBP17.47■□□□□ 0.39
CAPN1-205ENST00000526954 OLIG1Q8TAK6 271 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 UBA3Q8TBC4 463 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 STK32AQ8WU08 396 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 SLC35F5Q8WV83 523 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 ASB3Q9Y575 518 aa17.47■□□□□ 0.39
CAPN1-205ENST00000526954 ZNF638Q14966 1978 aaKnown RBP17.46■□□□□ 0.39
CAPN1-205ENST00000526954 REV3LO60673 3130 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 HHLA1C9JL84 531 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 LINC01565O15544 149 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 SOAT2O75908 522 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 CYP1A1P04798 512 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-205ENST00000526954 HOXB8P17481 243 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-205ENST00000526954 FECHP22830 423 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 ANXA13P27216 316 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 SSTR3P32745 418 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-205ENST00000526954 PLA2G4AP47712 749 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 GPR15P49685 360 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 EPHB3P54753 998 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 GSDMDP57764 484 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 TWF1Q12792 350 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 DDR2Q16832 855 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 ANKRD54Q6NXT1 300 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 WDTC1Q8N5D0 677 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 KCTD13Q8WZ19 329 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 SECISBP2LQ93073 1101 aaKnown RBP17.46■□□□□ 0.39
CAPN1-205ENST00000526954 PABPC5Q96DU9 382 aaKnown RBP17.46■□□□□ 0.39
CAPN1-205ENST00000526954 PDLIM2Q96JY6 352 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 SFXN1Q9H9B4 322 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 ARHGAP20Q9P2F6 1191 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 CEP83Q9Y592 693 aa17.46■□□□□ 0.39
CAPN1-205ENST00000526954 SSU72P8A0A1W2PR75 194 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 TNFRSF10BO14763 440 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 LRG1P02750 347 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 TNFAIP3P21580 790 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 RPL34P49207 117 aaKnown RBP17.45■□□□□ 0.38
CAPN1-205ENST00000526954 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-205ENST00000526954 TDRD12Q587J7 1177 aaKnown RBP17.45■□□□□ 0.38
CAPN1-205ENST00000526954 PIGZQ86VD9 579 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 MICALL1Q8N3F8 863 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 TMEM35BQ8NCS4 154 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 SLC30A5Q8TAD4 765 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 HSFY1Q96LI6 401 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 PCDHB18PQ96TA0 734 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 PRKD2Q9BZL6 878 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 PDCL3Q9H2J4 239 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 CYLDQ9NQC7 956 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 COMMD8Q9NX08 183 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 IL37Q9NZH6 218 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 CLEC1BQ9P126 229 aa17.45■□□□□ 0.38
CAPN1-205ENST00000526954 TULP2O00295 520 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 RFPL2O75678 378 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 PLEKP08567 350 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-205ENST00000526954 CSH1P0DML2 217 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 CSH2P0DML3 217 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 UNGP13051 313 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-205ENST00000526954 LTBRP36941 435 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 NOMO3P69849 1222 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 VEPH1Q14D04 833 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 RAB41Q5JT25 222 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 SDHAF4Q5VUM1 108 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 PMF1Q6P1K2 205 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 CYP26C1Q6V0L0 522 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 ITIH5Q86UX2 942 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 VPS36Q86VN1 386 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 PASD1Q8IV76 773 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 NUP93Q8N1F7 819 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 PSMG2Q969U7 264 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 ZNF707Q96C28 371 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-205ENST00000526954 SLC4A5Q9BY07 1137 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 CLDND1Q9NY35 253 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 CYTH4Q9UIA0 394 aa17.44■□□□□ 0.38
CAPN1-205ENST00000526954 C2orf16Q68DN1 1984 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 CCDC195A0A1B0GUA6 201 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 SLC38A8A6NNN8 435 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 DDX3XO00571 662 aaKnown RBP eCLIP17.43■□□□□ 0.383e-11■■■■■ 33.2
CAPN1-205ENST00000526954 XYLBO75191 536 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 TBX10O75333 385 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 GZMAP12544 262 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 HMGA1P17096 107 aaKnown RBP17.43■□□□□ 0.38
CAPN1-205ENST00000526954 EIF4A3P38919 411 aaKnown RBP17.43■□□□□ 0.38
CAPN1-205ENST00000526954 KIF11P52732 1056 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 CLEC16AQ2KHT3 1053 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 ASTE1Q2TB18 679 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-205ENST00000526954 SYCE2Q6PIF2 218 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 DENND5BQ6ZUT9 1274 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 CCDC186Q7Z3E2 898 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 DNAJB7Q7Z6W7 309 aaPredicted RBP17.43■□□□□ 0.38
CAPN1-205ENST00000526954 ELMOD1Q8N336 334 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 C1orf131Q8NDD1 294 aaKnown RBP17.43■□□□□ 0.38
CAPN1-205ENST00000526954 GPR152Q8TDT2 470 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 GIPC2Q8TF65 315 aa17.43■□□□□ 0.38
CAPN1-205ENST00000526954 MYRFLQ96LU7 910 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 215.2 ms